Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01574 ATGATAGAGAACGGTGACTCCAGTGGCGGAAGTTGTAGCAGGGAAGAGCAGGAGCAGGCATTGGTGGCGCTAGTCGAACACCGTACCCGTGAAGTGAAAAATCTACGTCAACGAATCTCCTATTACGAATCTCAGCTTGAGGAAGTAGAAAATAGGTTGCGAGATTCTGAATCCAAATTAGCTCGTCTTCGAGGTCAAACTAATTTGGCGTCATCTAGAAATTGCTTTACTGAAGAGCCTAAAACTATTAAGATGGAGCGCAGATCGAACAGTCCTGTTCACAGAAATGAGAGTTCCTCCAGAAACCAGCGTCAGTCTAAACCAGAACTTCTTATTCCTACTGTGAGTCCAAGAATCTCGCAACCTATGCTATTGCCAGGTTCTTCTGCAAAAGCCTCAATAAGTTCTAATTCTCAGGCCAGTCCATCTGTCTCGACTCATTCTAGTACTGGTGCTAGAATCAAAACTGAGAAACCTCACATGCTTTCTACCAAGCAGGAATGTATTGAAACCAAGGACAGAGGGACGAAAAGGAAGTTTGAGCAGAAAGAACACAAGGAATTGATTCCTTTAGTAAAGGGTAGTTCTTCACCATGCTTAGTACGCTGTCAGACAATCAACCATATCTCAAGTCAACACAAGAGGAAGTTGCGGAGTCTTGCTTTGTGTCCTGTGAATGATCTGCTTTTCGTAACCACTGCTCTGGATGGAATGGTCAACTTGTGGCAAGTTAGGGGATCAGGAGCCTCTTTACTTAGCACTACGGATTGCCTATCCCAAAAGCAGAGGAGATGGCCAGAAGATATAACTTGGCACCCGGATGGAAACAGCCTGTTTTCAGTGTACAGTGCTGACGGTGGAGATTCTCAAGTATCAGTTATGAATCTTAACAAGAAACAAAGGGGAGAACGTGTAAAATTCTTAGAGAACAAGCCTCATGTGAAGGGTATTATCAATAACATTGTTTTTATGCCCTGGGAAAATACCAGTTTTGCAACTGGGGGCAGTGATCATGCTGTTGTACTTTGGAGTGAGAATGATAGTGAGGACAAATGGACTCCAAAAGCATTGCACAGAAATAACCATTCATCTGCTGTCATGGGAGTCACTGGTCTACGGCAGAAATATACAGTTTTATCTGTTGGTGCAGACAAGAGAATTATTGGGCATGATGCTAATGCAGGAAGAGTACACTACAATCATCAGATTGATAGCAAGTGTATGAGTGTTCTGCCAAATCCATGCGACTTCAATCTATTTATGGTTCAAACAGGGACTCCGCAGAGGCAGCTTCGATTATTTGATATAAGATTGAGGGGGATGGAACTACATGCTTTTGGGTGGAAGCAAGAAAGTAGTGATTCTCAGTCAGCTCTAATAAATCAGGCTTGGTCACCTGATGGAATGTACATAACATCAGGTTCAGCAGATCCTATGATTCACGTCTTTGATATTAGGTATAATGCTAACAGCCCTTCCCAAACTATTAGAGCTCATCAGAAACGAGTCTTCAAAGCTGTGTGGCTTCAgtctcttcctcttctcatTTCCATATCATCCGATCTCAACGTTGGGTTACACAAGCTCTTGTA 1592 0.4253 MIENGDSSGGSCSREEQEQALVALVEHRTREVKNLRQRISYYESQLEEVENRLRDSESKLARLRGQTNLASSRNCFTEEPKTIKMERRSNSPVHRNESSSRNQRQSKPELLIPTVSPRISQPMLLPGSSAKASISSNSQASPSVSTHSSTGARIKTEKPHMLSTKQECIETKDRGTKRKFEQKEHKELIPLVKGSSSPCLVRCQTINHISSQHKRKLRSLALCPVNDLLFVTTALDGMVNLWQVRGSGASLLSTTDCLSQKQRRWPEDITWHPDGNSLFSVYSADGGDSQVSVMNLNKKQRGERVKFLENKPHVKGIINNIVFMPWENTSFATGGSDHAVVLWSENDSEDKWTPKALHRNNHSSAVMGVTGLRQKYTVLSVGADKRIIGHDANAGRVHYNHQIDSKCMSVLPNPCDFNLFMVQTGTPQRQLRLFDIRLRGMELHAFGWKQESSDSQSALINQAWSPDGMYITSGSADPMIHVFDIRYNANSPSQTIRAHQKRVFKAVWLQSLPLLISISSDLNVGLHKLL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01574 530 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 11 529 - -
Bva06g01574 530 Gene3D - 203 359 IPR015943 GO:0005515
Bva06g01574 530 MobiDBLite consensus disorder prediction 71 155 - -
Bva06g01574 530 Pfam WD domain, G-beta repeat 461 484 IPR001680 GO:0005515
Bva06g01574 530 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 11 529 - -
Bva06g01574 530 MobiDBLite consensus disorder prediction 79 94 - -
Bva06g01574 530 Gene3D - 360 529 IPR015943 GO:0005515
Bva06g01574 530 SMART WD40_4 489 528 IPR001680 GO:0005515
Bva06g01574 530 SMART WD40_4 447 484 IPR001680 GO:0005515
Bva06g01574 530 SMART WD40_4 353 391 IPR001680 GO:0005515
Bva06g01574 530 SMART WD40_4 301 344 IPR001680 GO:0005515
Bva06g01574 530 SMART WD40_4 202 243 IPR001680 GO:0005515
Bva06g01574 530 MobiDBLite consensus disorder prediction 95 110 - -
Bva06g01574 530 Coils Coil 32 66 - -
Bva06g01574 530 MobiDBLite consensus disorder prediction 121 152 - -
Bva06g01574 530 SUPERFAMILY WD40 repeat-like 208 527 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01574 Bva-Chr6 11259772 11265215 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01574 - - gmx:100799587 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01574 06 11259772 11265215 Bva06g01574 06 11259772 11265215 ECH