Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01543 ATGGATAATTCGGCTTTTGATTCCGCTGAATTGCAGCAAATTATCAAtcaagaaaaggaaaaagctaTGCTTAATGAAATGGTGGCAAAGCTGACGAGTGCGTGCTGGGACAAGTGCATCACGAGTACACCGGGGAGCAAGTTCAGTTCCAGCGAAACGAGTTGTCTCACAAACTGTGCCCAGCGTTATATGGACATGAGCATCCTCATCGTGAAACGGTTTCAGAATATGCAATG 236 0.4237 MDNSAFDSAELQQIINQEKEKAMLNEMVAKLTSACWDKCITSTPGSKFSSSETSCLTNCAQRYMDMSILIVKRFQNMQ 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01543 78 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 2 78 IPR035427 -
Bva06g01543 78 PANTHER TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG 1 78 IPR039238 GO:0005758
Bva06g01543 78 SUPERFAMILY Tim10-like 21 78 IPR035427 -
Bva06g01543 78 Pfam Tim10/DDP family zinc finger 13 76 IPR004217 -
Bva06g01543 78 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8-LIKE 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01543 Bva-Chr6 11073713 11074952 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01543 K17780 - rcu:8269172 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01543 06 11073713 11074952 Bva05g00212 05 1057526 1058650 ECH
Bva06g01543 06 11073713 11074952 Bva06g01543 06 11073713 11074952 ECH