Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01536 ATGCCGGAAGAGGACCTGGTTGATATAAAGTTTAGGTTGTATGATGGGTCGGATATAGGACCATTTAGGTATTCATCGGCCGCTACTGTCGATATGCTTAAGCAAAGAATTGTGTCCGACTGGCCCAAAGGTAAAACAGTCATCCCAAAGGCAGCAAatgaagtaaaattaattagttctGGTAAAATCTGGGAAAACAACAAGACTGTTGGTCAGTGTAAAGTACCTTTTGGTGAGCCTGCAGGGGGAGTTATAATAATGCATGCTGTTGTACAGCCATCTCTAGCAAAAACTAAAGCTGagaaaaaaattgatgattcaCCCAGGAAGATTGTCTGCGCTTGTTCCATAATGTG 356 0.3904 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVIPKAANEVKLISSGKIWENNKTVGQCKVPFGEPAGGVIIMHAVVQPSLAKTKAEKKIDDSPRKIVCACSIM 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01536 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 118 - -
Bva06g01536 118 PIRSF MUB 1 118 IPR017000 -
Bva06g01536 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Bva06g01536 118 CDD Ubl_MUBs_plant 6 93 - -
Bva06g01536 118 Gene3D - 1 100 - -
Bva06g01536 118 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
Bva06g01536 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Bva06g01536 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01536 Bva-Chr6 11029885 11032806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01536 - - gmx:100810070 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01536 06 11029885 11032806 Bva06g01536 06 11029885 11032806 ECH