Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01522 ATGGAGAAACCATCGTCATCGTCGACGGCCAAGAGTAGAGCTAAAGGAAAAGACGCAGATATGAATTATTCCCGAATTGCTCTGATTAGCGAGGATGTTCTTCATAATATTCTTGCTAAATTGCCAGCTCCGTCTTTCGCTTCAGCAGCTTGCGTTAACAAATCCTGGAACCGTATTTGCAATCGCATACTTTCTCGTCCTAAGCTCTCCTCTGCTCTTTCTCTCAATCCTTCATTGCCGGATGCTGTAAAAGAGGTTCTTGATAAGGTTCTCTGTGAGCCCATCCGACCGCATTTTGCTATTGCCAATGTTGGAAGTGGTTTTGATCTAACCAAGACTCTAGAACTTATTTCAGAGAGATTAGGATCCAACATTGCAGTCATTGTTTCTGAGGCTAATGGAATTATCGGGAGAGATGCTCTGACTAGTGAACATAATGAGGTCAAATGGGGTGCTCTTTTTAGTGGATTCAGTAGCGaaacatatgaaaaaaatataaataatggcATACTTTTGACAATTGGCTATTTGCCAGGACTGAAAGTGGATGCCATCCCACTACTACGACCAAGAAAGACACCTCAAGCGCCAGTTATTAACAAGTTTCTTCGGAATATCAAGGAATATTCAACTTCTGTCTCCGGATCTGCATTCCCTGTTGGGATTATATTGTTTGGGGAAGTAAGTACTAACATGAAACCAGTTCTGGAGACATTGGATTATGCCATGCCTATGGACACTATCATTGTGGGTGATGAGGGAAGCTGCTTTGTATACAGAAGTAGAAATAATTCTAGAGATACTTGTGGTAGAACGGGATTCTTAGAAGCTGTTGCTCTTGTATTTGCTGAGGACAGCAAGAGTGATTCCGGAAAAATCAGGTTTCATATTGCGCAGTCAAATGGTGTTTTACCTATAGGTGCCGTGTACAAGGCAGCTTCTGTAAGAACAAGCAGCACTGATAGTACAACATGGCTAAATGCCAGGAGGGAGGGGCAACAACAAATTCTTGACGGTCAAAGTATTCTAAATGTTATTAACAATGAGCTGGAAAATCATATTGAGCCTCCTGATTTGTACATTGGGGTAACTAAACGAAGGAAATTCTCCATTGGATCAGAGTGGCCAAGGCCAAGAACATGGTTGACATTTCATGCAGTTGTGGGAGGTGATGACGAGTATCTGTACGTTGATGGGGTTGGCATCAAAACTGGAGATACATTTCAATTCTACCATTCAGATCCCAATACAGCATTGGCTTCATGCGTTCACGCCTCTGATAAACTCAAGAGTATTAGGCCGGAAAAGAATTCTAAGGACTGCGAGGTTGATGCAGAGAATGACGTTAATGTTTTTGGGGGCCTGATTTTTACTTGCTATGGCCGTGGTGAGTCATTCTTTGGACGATTCAATGTTGATAGCTCACCTTTCTTGGAGAACTTTCCTGGAGTGCCATTTGCAGGAATATTTTGTAGTGGGGAAATTGGGCGTCCATCTTCAAATGCTTTGACTGATCAATGCCAAGGACAAAGCTCCGTTAGTTGCTGTCTACATGCTTACAGTAGTGTTTATCTAGTCATGTCATATACTAGGCCGTCTGTCATATG 1607 0.4188 MEKPSSSSTAKSRAKGKDADMNYSRIALISEDVLHNILAKLPAPSFASAACVNKSWNRICNRILSRPKLSSALSLNPSLPDAVKEVLDKVLCEPIRPHFAIANVGSGFDLTKTLELISERLGSNIAVIVSEANGIIGRDALTSEHNEVKWGALFSGFSSETYEKNINNGILLTIGYLPGLKVDAIPLLRPRKTPQAPVINKFLRNIKEYSTSVSGSAFPVGIILFGEVSTNMKPVLETLDYAMPMDTIIVGDEGSCFVYRSRNNSRDTCGRTGFLEAVALVFAEDSKSDSGKIRFHIAQSNGVLPIGAVYKAASVRTSSTDSTTWLNARREGQQQILDGQSILNVINNELENHIEPPDLYIGVTKRRKFSIGSEWPRPRTWLTFHAVVGGDDEYLYVDGVGIKTGDTFQFYHSDPNTALASCVHASDKLKSIRPEKNSKDCEVDAENDVNVFGGLIFTCYGRGESFFGRFNVDSSPFLENFPGVPFAGIFCSGEIGRPSSNALTDQCQGQSSVSCCLHAYSSVYLVMSYTRPSVI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01522 535 Pfam F-box domain 29 64 IPR001810 GO:0005515
Bva06g01522 535 Pfam FIST C domain 401 497 IPR019494 -
Bva06g01522 535 SUPERFAMILY F-box domain 26 61 IPR036047 GO:0005515
Bva06g01522 535 PANTHER F-BOX ONLY PROTEIN 22 25 533 - -
Bva06g01522 535 SMART fbox_2 29 69 IPR001810 GO:0005515
Bva06g01522 535 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 25 533 - -
Bva06g01522 535 SMART FIST_C_2 342 498 IPR019494 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01522 - - gmx:100815778 686.026