Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01517 ATGGCCAGTCAAAGTGTTTCTTCTCGAAGAAGTTTGTCGTCGGTGAATACgcagggaaaaaagaaatcctctGATAATGGAGGCCCGGATTCTGCTAGTTCTCGAAAATCTTTTTCGGCTTCGCGCCCTTTTGGATTAACGGGAGATCGTACAGTAAAATCATTGCGACTCTCAAAGGCGTTGACAGTACCTGAAACAACAGCTTTGTCTGAAGCTTGCCGTCGGATGGCTGCTCGTAGAGTTGATGCTCTTTTACTAACTGATTCTAATGCATTGCTTTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTCTTGCCCGTGACATTAGCCTTGAAGATACACCCGTTTCCAAGGTCATGACAAGGAATCCGGTATTTGTCCTCTCTGACACTCTTGCTGTGGAAGCCCTCCAAAAGATGGTTCAAGGGAAATTTAGACATTTACCTGTGGTGGAGAATGGAGAAGTTATTGCGTTACTTGACATAGCAAAATGTTTGTACGATGCTATTGCTCGTATGGAAAGGGCGGCTGAGAAAGGAAGAGCTATTGCAGCAGCTGTTGAAGGTGTTGAAAAACACTGGGGGTCATCTGCTTCTGGATCCAATTCATTCATTGAGACTCTCCGGGAGCGGATATTCAGGCCCTCTTTGTCTACAATCATTCCTGAGAATTCAAAGGCGGTTACAGTTTCACCAACTGAATCTGTTTTGACAACTACAAAGAAGATGCTTGAATTTCGTGCAAGCTCTGCAGTTGTGACAGTTGATGACAAACCTCGTGGCATTCTCACTTCAAAGGATATCTTGATGCGGGTAATTGCACAAAATCTTCCTCCAGAGTCAACTCTTGTTGAGAAGGTCATGACTCCAAATCCAGAGTGTGCAACAATTGATACACCAATCGTTGATGCGCTTCACACTATGCATGATGGAAAATTTTTACATCTTCCTGTGGTAGATAGAGATGGCAATGTAGTTGCTGTGGTCGATGTAATCCATATGACCCATGCAGCTGTGGCAACTGCTGGAAATGCTAATAACCTTAACAATGAAGCTGCAAGCTCCATGATGCAAAAATTTTGGGATTCAGCCATGGCCATGTCTccaaatgatgatgatgaagagacGCGAAGTGAAAATTCCTTGAAATTGCCTTCCGACGGAGGAGAGACTGGGCAATCTCTTCCCTTTCATTCGTCAGTCATGCCgaattcattttccttcaaaatacAAGATAAGAAGGGCCGAATGCATAGATTCACATGCGATACTAGGAGCCTTACAGAAGTCATAACTTCAATCATTCAGAGACTCCGTGATGACATTGACCCCAATAACCTACCCCAAATTCTGTACGAGGATGAAGACCGTGATAAAGTGGTGTTGGCTTCAGATAGTGATCTTGCGGCTGCGGTCGACCACGCAAAGATGGCTGGTTTGAAGGGACTGAGATTGCATTTAGACTACTCAGGAACGCCTCGTCGCAGAAGAGGTTCTGGTTCCGGAGGTACGGTTTATGCTAATTCAGATGCATGGGCGTCGGCGTACAGTGCCGTCGCTGCTGGGGCTGCTATTGTTGCTGGCTTAGGTTTATTAACATACTTGAATCGAACATG 1622 0.434 MASQSVSSRRSLSSVNTQGKKKSSDNGGPDSASSRKSFSASRPFGLTGDRTVKSLRLSKALTVPETTALSEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVLARDISLEDTPVSKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGRAIAAAVEGVEKHWGSSASGSNSFIETLRERIFRPSLSTIIPENSKAVTVSPTESVLTTTKKMLEFRASSAVVTVDDKPRGILTSKDILMRVIAQNLPPESTLVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVVDRDGNVVAVVDVIHMTHAAVATAGNANNLNNEAASSMMQKFWDSAMAMSPNDDDEETRSENSLKLPSDGGETGQSLPFHSSVMPNSFSFKIQDKKGRMHRFTCDTRSLTEVITSIIQRLRDDIDPNNLPQILYEDEDRDKVVLASDSDLAAAVDHAKMAGLKGLRLHLDYSGTPRRRRGSGSGGTVYANSDAWASAYSAVAAGAAIVAGLGLLTYLNRT 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01517 540 Pfam PB1 domain 408 490 IPR000270 GO:0005515
Bva06g01517 540 CDD CBS_pair_MUG70_2 226 341 - -
Bva06g01517 540 CDD CBS_pair_MUG70_1 57 173 - -
Bva06g01517 540 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 20 528 IPR034896 -
Bva06g01517 540 Gene3D - 228 291 - -
Bva06g01517 540 MobiDBLite consensus disorder prediction 1 41 - -
Bva06g01517 540 Gene3D - 408 489 - -
Bva06g01517 540 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 20 528 - -
Bva06g01517 540 SMART cbs_1 293 341 IPR000644 -
Bva06g01517 540 SMART cbs_1 228 275 IPR000644 -
Bva06g01517 540 SMART cbs_1 59 107 IPR000644 -
Bva06g01517 540 SMART cbs_1 125 169 IPR000644 -
Bva06g01517 540 MobiDBLite consensus disorder prediction 384 398 - -
Bva06g01517 540 CDD PB1_MUG70 408 492 - -
Bva06g01517 540 Gene3D - 36 187 IPR046342 -
Bva06g01517 540 SUPERFAMILY CBS-domain pair 228 339 IPR046342 -
Bva06g01517 540 ProSiteProfiles CBS domain profile. 56 113 IPR000644 -
Bva06g01517 540 ProSiteProfiles CBS domain profile. 122 180 IPR000644 -
Bva06g01517 540 SUPERFAMILY CBS-domain pair 49 166 IPR046342 -
Bva06g01517 540 ProSiteProfiles CBS domain profile. 222 282 IPR000644 -
Bva06g01517 540 ProSiteProfiles PB1 domain profile. 405 492 IPR000270 GO:0005515
Bva06g01517 540 Pfam CBS domain 227 272 IPR000644 -
Bva06g01517 540 Pfam CBS domain 286 333 IPR000644 -
Bva06g01517 540 Pfam CBS domain 58 106 IPR000644 -
Bva06g01517 540 Pfam CBS domain 118 162 IPR000644 -
Bva06g01517 540 MobiDBLite consensus disorder prediction 368 398 - -
Bva06g01517 540 MobiDBLite consensus disorder prediction 1 45 - -
Bva06g01517 540 SUPERFAMILY CAD & PB1 domains 399 495 - -
Bva06g01517 540 ProSiteProfiles CBS domain profile. 290 348 IPR000644 -
Bva06g01517 540 SMART PB1_new 407 492 IPR000270 GO:0005515
Bva06g01517 540 Gene3D - 292 377 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01517 Bva-Chr6 10929378 10934789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01517 - - rcu:8269215 791.186