Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01509 ATGACGGCTAGTGCTCCAACAACCGCATTCTCCACACACTCCTctgcttcatcttctttttcttcttcctgcaAATCACTGAAACGCATTCTCAGATTTGCCCTCCCTCCTTCCCCTGTTACCCAGAAGCTCACTCGTCCCAGTTCACTTCGGATTTCTAGTTCCCTCCCTaacccaaaccccaaaccggCTTCAGCTGCATCTACTGCCTCCTCCTCCGTTTCCGCCCCAATCACCACTACCACCGCTGACCCAGAAGCTTTTGTTTCCCAATTTGCGGCTAATGAACCCAGAAAAGGCGCTGACATCCTCGTTGAAGCTCTTGAGCGGCAAGGCGTCACCAATGTCTTTGCTTACCCCGGTGGCGCTTCAATGGAGATCCACCAAGCGCTCACGCGCTCCAACATCATCCGGAACGTTCTTCCCCGGCATGAGCAAGGTGGCATCTTTGCAGCCGAGGGTTACGCACGATCCTCTGGGCTTCCCGGCGTCTGTATCGCCACCTCTGGCCCCGGAGCTACCAATCTTGTCAGTGGGCTTGCCGATGCTTCGCTTGACAGTGTGCCCGTCATAGCCATTACAGGGCAAGTCCCCCGCAGAATGATTGGTACTGATGCATTCCAAGAGACTCCAATCGTTGAGGTAACTAGATCAATTACAAAGCATAATTATCTAGTTCTAGATGTAGAAGATATTCCTAAGGTTGTAAGTGAGGCATTTTATTTAGCAACTTCGGGTAGACCTGGTCCTATACTAATCGATATACCAAAAGATGTACAACAGCAGCTTGCGGTTCCAAATTGGGACCAACCCATTAAGTTGACTGGGTATATGTCGAGGTTGCCCAAATCTCCCGATGAGACCCAATTAGAACAGATTGTGAGGTTGATATTAGAGTCGAATAAACCCGTTTTGTATGTTGGTGGTGGTTGTTTGAACTCAAGTGAAGAGTTGAGGCAGTTTGTGAAGCTTACAGGGATCCCTGTTGCTAGTACTTTGATGGGTCTAGGAGCGTACCCCACTGCGGATGAATATTCCCTTCGAATGCTTGGAATGCATGGAACTGTTTATGCTAATTATGCCGTTGATAGAAGTGACTTGTTACTTGCATTTGGGGTGAGGTTTGATGATCGTGTGACAGGAAAGCTCGAGGCTTTTGCTAGCAGAGCTAAAATTGTTCATATGGACATTGATTCAGCTGAGATTGGGAAGAATAAGCAGCCCTATATTTCAGTTTGTGCAGATTTGAAGGTGGCCTTGAAAGGCATTAATGCTATATTGGAGAGCAAACGAATCAAGGGTAAACTTGATTTTGGAGCTTGGAGAGAGGAGTTGAACGAGCAGAAACAAAAATTCCCATTGAGTTATAAGACGTTTGAGGAAGATATTTCTCCTCAATATGCCGTTGAAGTTCTCGACGAATTGACAAATGGAAATGCAATTATAAGTACAGGAGTTGGACAGCATCAGATGTGGGCTGCTCAATTTTACAAATACAAGAGACCTAGGCAATGGTTAACATCAGGGGGTCTTGGAGCTATGGGTTTTGGGTTACCTGCTGCCATTGGAGCTGCTGTAGCTAACCCCCATGCACTTGTTGTCGACATTGATGGTGATGGTAGCTTTATTATGAATGTTCAGGAGCTGGCCACCATAAGGGTGGAGAATCTTCCCGTTAAGATTATGCTGCTGAATAATCAACACTTGGGTATGGTTGTTCAATGGGAAGATCGTTTCTATAAATCCAATAGAGCCCACACCTACTTGGGAGACCCTTCTAAGGATTCTGAGATATTCCCAAATATGTTGAAGTTTGCAGATGCTTGTGAGATTCCAGCAGCTCGTGTAACAAAGAAGGAAGATCTCAGAGCAGCAATCAAGAAAATGTTGGATACTCCTGGCCCGTACCTTCTTGATGTGATTGTTCCTCATCAAGAGCATGTGTTGCCCATGATTCCAAGTAATGGAACCTTCAACGACGTGATAACTGAGGGTGATGGCAGAACAAGTTACTG 2015 0.4511 MTASAPTTAFSTHSSASSSFSSSCKSLKRILRFALPPSPVTQKLTRPSSLRISSSLPNPNPKPASAASTASSSVSAPITTTTADPEAFVSQFAANEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSNIIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATNLVSGLADASLDSVPVIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVEDIPKVVSEAFYLATSGRPGPILIDIPKDVQQQLAVPNWDQPIKLTGYMSRLPKSPDETQLEQIVRLILESNKPVLYVGGGCLNSSEELRQFVKLTGIPVASTLMGLGAYPTADEYSLRMLGMHGTVYANYAVDRSDLLLAFGVRFDDRVTGKLEAFASRAKIVHMDIDSAEIGKNKQPYISVCADLKVALKGINAILESKRIKGKLDFGAWREELNEQKQKFPLSYKTFEEDISPQYAVEVLDELTNGNAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPHALVVDIDGDGSFIMNVQELATIRVENLPVKIMLLNNQHLGMVVQWEDRFYKSNRAHTYLGDPSKDSEIFPNMLKFADACEIPAARVTKKEDLRAAIKKMLDTPGPYLLDVIVPHQEHVLPMIPSNGTFNDVITEGDGRTSY 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01509 671 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 485 640 IPR011766 GO:0003824|GO:0030976
Bva06g01509 671 Gene3D - 455 641 - -
Bva06g01509 671 Pfam Thiamine pyrophosphate enzyme, central domain 291 421 IPR012000 GO:0000287|GO:0030976
Bva06g01509 671 ProSitePatterns Thiamine pyrophosphate enzymes signature. 522 541 IPR000399 GO:0000287|GO:0030976
Bva06g01509 671 MobiDBLite consensus disorder prediction 38 78 - -
Bva06g01509 671 MobiDBLite consensus disorder prediction 41 78 - -
Bva06g01509 671 CDD TPP_AHAS 463 654 IPR039368 GO:0030976
Bva06g01509 671 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 99 262 IPR012001 GO:0030976
Bva06g01509 671 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 462 663 IPR029061 -
Bva06g01509 671 SUPERFAMILY DHS-like NAD/FAD-binding domain 285 453 IPR029035 -
Bva06g01509 671 Gene3D - 87 281 - -
Bva06g01509 671 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 68 670 IPR045229 -
Bva06g01509 671 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 94 274 IPR029061 -
Bva06g01509 671 Gene3D - 290 454 - -
Bva06g01509 671 MobiDBLite consensus disorder prediction 1 21 - -
Bva06g01509 671 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 99 663 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Bva06g01509 671 PANTHER ACETOLACTATE SYNTHASE 68 670 - -
Bva06g01509 671 CDD TPP_PYR_POX_like 102 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01509 Bva-Chr6 10903496 10905755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01509 K01652 - gmx:100783934 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01509 06 10903496 10905755 Bva06g01509 06 10903496 10905755 ECH