Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01505 ATGAACTCTCGCGAGGTTGCTCTAGTCACTACGGTTACTGCATTCGGTGCTTTGGCCTCTGCAATTGCTTTCcgcttcttcttcaactccAAAAAGCACACATCCAAGATCAATTTGACTCAAAACGTATTCTCGAAGAATCGCTCTTCTTCGGATCCTTTCGATCCCTCTAAGCGCAAGGGATACTTGTCTTGGGATGACTATTTTATGGCAATAGCATTTTTGTCAGCTGAAAGATCGAAAGATCCTAACAGGCAGGTGGGGGCGTGCTTGGTGAGTCAAAATGGTATAATTCTTGGCATTGGCTATAATGGATTTCCAAGAGGTTGTTCTGATGACAAGCTACCTTGGGCAAAGAAATCAAAGACTGGAGATCCTTTGGAGACAAAGTATCCTTATGTTTGTCATGCAGAAGTAAATGCTATTCTTAACAAAAATCATGCATCAGCTGCTGGACAGCGGCTATACGTGACCATGTTTCCTTGCAACGAGTGTGCTAAGATCATAATCCAGTCAGGAGTTTCTGAAGTCATTTATTTTGTGGAGAAGAGGTTAGAAAATTCAGATGTTGCATATATTGCTTCTCACAAGCTACTTTCGTTGGCTGGGATCAAAgTCAGGAAACATCAACCGCTGATGAAAGAAATCCATATCAAGTTTGAGGAGCTGTA 671 0.4069 MNSREVALVTTVTAFGALASAIAFRFFFNSKKHTSKINLTQNVFSKNRSSSDPFDPSKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGIILGIGYNGFPRGCSDDKLPWAKKSKTGDPLETKYPYVCHAEVNAILNKNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLENSDVAYIASHKLLSLAGIKVRKHQPLMKEIHIKFEEL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01505 223 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 136 169 IPR016192 GO:0008270|GO:0016787
Bva06g01505 223 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 222 IPR015517 -
Bva06g01505 223 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 64 180 IPR002125 -
Bva06g01505 223 Gene3D Cytidine Deaminase, domain 2 55 223 - -
Bva06g01505 223 SUPERFAMILY Cytidine deaminase-like 66 210 IPR016193 GO:0003824
Bva06g01505 223 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 64 206 IPR002125 -
Bva06g01505 223 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 222 - -
Bva06g01505 223 CDD deoxycytidylate_deaminase 66 179 IPR035105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01505 Bva-Chr6 10883200 10886716 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01505 K01493 - gmx:100792003 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01505 06 10883200 10886716 Bva06g01505 06 10883200 10886716 ECH