Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01504 ATGGAGGTCGAACTCAAGGAGATGCTCGCTGATCTCCAGTCCCTTAAGCAATCGCTTCCTGATCCATCTCATCGTGATTCACTTGATAAGCTTGAATCGCGTCTCGAGCATCTTACTAATCTTGCAAAAGCTGTACCTGTTCGTCGCTCCAAAGTCAAGGATATGAGTGTTGAGGTTGTAGATAGCAATCCATACAGTCGGCTTATGGCACTTCAGAGGATGGGAATTGTGGAGAACTATGAAAGAATACGGGAATTCTCAGTTGCTATAGTTGGAATAGGCGGTGTAGGAAGTGTTGCTGCTGAGATGCTAACAAGATGTGGTATAGGTCGCCTTTTGTTGTATGATTATGACAAAGTAGAGCTAGCCAACATGAATAGGCTGTTCTTTCGTCCAGATCAGGTAGGCATGACAAAGACAGATGCAGCTGTACAGACTCTTTCAGATATAAACCCTGATGTTGTACTTGAGAGCTATACACTGAACATCACAACAGTCCAAGGTTTTGATACGTTCATGTCAAGTTTGGAAAATAAGTCATTCCGCCCTAGTAAACAAGGTAGTGGTGTAGATCTTGTCTTAAGCTGTGTGGATAATTATGAAGCAAGAATGGCTGTTAATCAGGCATGCAATGAACTGGGTCAGACATGGTTGGAGTCAGGTGTATCTGAAGATGCCGTTTCTGGTCATATTCAGTTACTTATTCCTGGTGAAACTGCCTGTTTTGCATGTGCACCTCCTCTGGTTGTAGCATCTGGAGTAGATGAACGCACACTCAAGCGTGAAGGGGTTTGTGCTGCATCTTTACCCACAACCATGGGAGTTGTTGCAGGGCTACTAGTTCAGAACACACTCAAATTCTTGTTAGGATTTGGACAAGTATCTCCATACTTGGGATATAATTCTCTTAAGGATTTTTTCCCAACCATGCAAATGAAGCCAAATCCTCAGTGTTCGAATGCAGCTTGCTTGGAAAGACAGAAAGAGTACATTCTTGCAAAACCAGCAAGAGATGCTGCTGCAAAAGCAAAATTGGAAGCTGAAGCACCTGAGGAAGGACCACTTCATGATGATAATGAATGGAATATAAGTGTTGTGGATGATAGCGGACTAGTGGATGGTTTTGATTCCAAAAGTTcagATGCCTTACCTGAAGGTCTTACCCGAGAACTTCCAAACGCGGACGAATTTTGTAAATTACCTACTGAAGCCCCGACTACTGACAGTGACGACCTTGAAGAACTCCAACGGCAGCTTGAAGCCATTAATTCTGCTTA 1277 0.4323 MEVELKEMLADLQSLKQSLPDPSHRDSLDKLESRLEHLTNLAKAVPVRRSKVKDMSVEVVDSNPYSRLMALQRMGIVENYERIREFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVQTLSDINPDVVLESYTLNITTVQGFDTFMSSLENKSFRPSKQGSGVDLVLSCVDNYEARMAVNQACNELGQTWLESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKFLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNAACLERQKEYILAKPARDAAAKAKLEAEAPEEGPLHDDNEWNISVVDDSGLVDGFDSKSSDALPEGLTRELPNADEFCKLPTEAPTTDSDDLEELQRQLEAINSA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01504 425 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Bva06g01504 425 Pfam ThiF family 65 319 IPR000594 -
Bva06g01504 425 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 425 IPR045886 -
Bva06g01504 425 MobiDBLite consensus disorder prediction 375 411 - -
Bva06g01504 425 CDD ThiF_MoeB_HesA_family 64 312 - -
Bva06g01504 425 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 59 324 IPR035985 GO:0008641
Bva06g01504 425 Gene3D - 82 343 - -
Bva06g01504 425 PANTHER BNAANNG16230D PROTEIN 1 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01504 Bva-Chr6 10876885 10882939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01504 60 175 EF-hand Containing Proteins AT2G30110 33.613 2.89e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01504 K12164 - gmx:100816132 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01504 06 10876885 10882939 Bva06g01504 06 10876885 10882939 ECH