Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01499 ATGGCAGCGCCTGATCTCCGCCGTCCGTTCAAGCGAGCGGCCATCTCCGATCAACAGAGACGCCGGGAACTGTCGCTGCTCCGGCAGGCGCAGAATCGCCGCGATGCTCAGCACCACGCTCGCTGCTTGGCCTCTACTGCATTGTCTCTGCAATCCGAAGGTTTCGAAGCATCTGTGTCGGAACCCAACATTGACGTTGAACCTGTATCCGAATCCCCACCGGGCCATGAGCCCGAGAACGAACAGGACTCACAGGAGCCTTCGCTGAAGGACCTCAATGTCGTTCAGGCCTCGAAGCTCAAGGGCCCAGAATCTCGGAAATGGTTTGCGAGGCAACTTATGCTTCCTGAATGGATGATCGATATACCTGACAGACTTAGTGAAGACTGGTATGTATTTGCTAGGCCATCTGGTAAACGATGCTTTGTTGTTTCTTGTAATGGAACAACGATTGGTAGGCTAAGGAATGGGTCTATACTGCATCGTTTTCCATCTGCTCTACCTAATGGAGCAAAGAAAAGGGATTTCTCCGGTTCAGCTCAATCTTATTCTATACTGGATTGCATCTTCCATGAGCCTGATCAAACTTACTATGTTATCGACATGGTTTGCTGGCGGGGATACTCTCTTTACGACTGCACTGCTGAGTTCAggtttttttggttaaattccAAACTTGTGGAGACGGGTGCTTGTGACGCTCCTTCGTATTATCACAAATACAGGTTCAGTCTGGTTCCAGTATACAATTGTGACCAGAGTGGTCTGCTTGCAGCATATACAGCACAAGTACCTTATGTCAAAGACGGTCTTTTGTTTTACAACAAGCATGCACATTACCAGACAGGAAATACGCCACTAGCATTAGTTTGGAAGGATGAGAATTGCAGTCAATATGTTATCGATACAGATAGTAGAGGGCAGGTTCCAAGCCAACAGCAGGTGGTTTTGGAGCTACAAGAAGATGGGAAACTGACTACCTCAGATGACCCTCCTGTTGTATTTGGTTGCTTAGATGGAAGCTTTACACAACAGtcAGGTTTGCAATCCGGATGTCTTCTACGATTTGCAGTTGGAGAGGGAGGATTGGTTTTTGTGGACGGCAAGCTGGAGAAAGCTGATCTACATTATCTTGGCAATGTCAATCGAGCTCGAGCTTTTGCTGATAGTTTCTCCAAGGTTATGTTCCAATACGGTGTTCGGCATTCGCCCCTGGGAATCGATGATCTCTTGGGATCTGTCAGCTCACCAGTTGATCAGGAAGACAAACCTTCCGATATTGAGATGGATGGTTG 1295 0.4718 MAAPDLRRPFKRAAISDQQRRRELSLLRQAQNRRDAQHHARCLASTALSLQSEGFEASVSEPNIDVEPVSESPPGHEPENEQDSQEPSLKDLNVVQASKLKGPESRKWFARQLMLPEWMIDIPDRLSEDWYVFARPSGKRCFVVSCNGTTIGRLRNGSILHRFPSALPNGAKKRDFSGSAQSYSILDCIFHEPDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLVETGACDAPSYYHKYRFSLVPVYNCDQSGLLAAYTAQVPYVKDGLLFYNKHAHYQTGNTPLALVWKDENCSQYVIDTDSRGQVPSQQQVVLELQEDGKLTTSDDPPVVFGCLDGSFTQQSGLQSGCLLRFAVGEGGLVFVDGKLEKADLHYLGNVNRARAFADSFSKVMFQYGVRHSPLGIDDLLGSVSSPVDQEDKPSDIEMDG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01499 431 CDD Snurportin-1_C 108 294 - -
Bva06g01499 431 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 106 292 - -
Bva06g01499 431 MobiDBLite consensus disorder prediction 1 20 - -
Bva06g01499 431 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 4 430 IPR017336 GO:0005634|GO:0005737|GO:0061015
Bva06g01499 431 Gene3D DNA ligase/mRNA capping enzyme 3 317 - -
Bva06g01499 431 MobiDBLite consensus disorder prediction 412 431 - -
Bva06g01499 431 MobiDBLite consensus disorder prediction 72 86 - -
Bva06g01499 431 MobiDBLite consensus disorder prediction 54 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01499 Bva-Chr6 10846609 10850123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01499 K13151 - jre:108994902 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01499 06 10846609 10850123 Bva06g01499 06 10846609 10850123 ECH