Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01494 ATGaataatcaaacaaagaaTGTTCCCGCACCGTCTTATTTTGGCAATGCCGGAACAGTTCCACAGTCGACCCCCATGAGCCACCCACCCCATCTTCTCTCTCAGTCACAGCCTCAAACACAAGGTGCATCTCACTTCCCTGGTCACTTTCAGCTTTCGGAGCCCCAAGCCCAAGTGCTAGGACCGGCGCAGTATGCACAGGCTCACACCCAAGTGCAATCTCAGGCAGCCCATGCTCAATTTCAAGCTCATACCCAGCCTATGGTTACTCAGTTGCATAATGCTAATACTAATACTGTTACTGTTAACATGACACCATCTGTTTCCACTCCTGGCAGTGGAAGTGCCAAGCGCGCAACACAAAAGCCACCTTCTCGGCCTCCTGGTTCTTCCAATGCCAACCCATCCTCACCATTTAAGACCATGGAATTGACTCTTGCTGCTCGCAGAAAAAAGCGGAAATTGCTGGAGAAGCAAATACCAGAAAAGATGGCTGCTCTTCTTCCCGAATCTGTTCTCTATACTCAGTTGCTTGAATTTGAGGGTCAAATAGATGCTGCATTATCCAGGAAAAAGATTGACATACAAGAGTCTGTTAAAAACCCTCCCTCTGCTCAAAAAACTCTCCGTGTATATGTGTACAATACTTTCTCAAATCAGACACAAACGGAGTCTGAGAGGAAAGATGGAGAGGAACCTTCTTGGTCACTTAAGTTAACTGGAAGGATATTGGAAGATGGTAAGGATCCTGTGGTAGCTGGAATTTCAAAGAAATCAAGCCATTTGTACCCaaagttttcatcttttttcaaaaaaattaccatataCTTGGATCAGAGCCTTTATCCTGATAATCATGTCATCTTATGGGACAGTGCTCGTTCACCTATTCAACAGGATGGCTTTGAGTTGAAGAGGAAAGGAGACAGGGAATTTAATGCAGTGGTCAGAATAGAAATGAAGTATGCAACTGAAAAGTTTATAGTTTCAGCACAGCTTTCTAAAGTTTTAGGGATTGAAGTTGAAACTCGCCCAAGAATAATAGCTGCTCTTTGGCATTATATCAAGTCTAGGAAGTTACAGAGCCCAAATGAcccttccttttttatttgtgatcCCCCTCTCCAGAGGGCGTTTGGTGAAGAGAAGATAAAATTCTCCATGGTTTCGCAGAAGGTATCCCAGCATCTGTCACAGCCACAGCCTATACATTTTGAGCATAAAATCAAGCTTTCAGGAAATTGTCCGGCTGGAACTGCTTGTTATGATGTACTGGTTGATGTGCCTTTAACACCGCAGAAGGATATATCCGCATTCTTGACCAGCACTGAGAGGCACAAAGATATTGATGCATGTGATGAAGTGATCTCTACTGCCATAAAGAAGATCCATGAGCATCGTCGGAGGCGGGCTTTCTTTCTTGGGTTTAGTCAGTCTCCAGCAgagtttattaatattttaatcgcTTCTCAGAGCAAGGATCTAAAGCTTGTTGCTGGAGATGCCAGCCATACTGCCGAAAAGGAGCGACATTCTGAATTCTACACTCAACCCTGGCTTGAGGATGCTGTCATTCGTTACCTGAATCGCAAAACTGCTGGAGTCGATGGTCCTGGAAGCGCCTA 1625 0.4283 MNNQTKNVPAPSYFGNAGTVPQSTPMSHPPHLLSQSQPQTQGASHFPGHFQLSEPQAQVLGPAQYAQAHTQVQSQAAHAQFQAHTQPMVTQLHNANTNTVTVNMTPSVSTPGSGSAKRATQKPPSRPPGSSNANPSSPFKTMELTLAARRKKRKLLEKQIPEKMAALLPESVLYTQLLEFEGQIDAALSRKKIDIQESVKNPPSAQKTLRVYVYNTFSNQTQTESERKDGEEPSWSLKLTGRILEDGKDPVVAGISKKSSHLYPKFSSFFKKITIYLDQSLYPDNHVILWDSARSPIQQDGFELKRKGDREFNAVVRIEMKYATEKFIVSAQLSKVLGIEVETRPRIIAALWHYIKSRKLQSPNDPSFFICDPPLQRAFGEEKIKFSMVSQKVSQHLSQPQPIHFEHKIKLSGNCPAGTACYDVLVDVPLTPQKDISAFLTSTERHKDIDACDEVISTAIKKIHEHRRRRAFFLGFSQSPAEFINILIASQSKDLKLVAGDASHTAEKERHSEFYTQPWLEDAVIRYLNRKTAGVDGPGSA 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01494 541 PANTHER CHROMATIN REMODELING COMPLEX SUBUNIT 99 538 - -
Bva06g01494 541 SUPERFAMILY SWIB/MDM2 domain 318 407 IPR036885 -
Bva06g01494 541 MobiDBLite consensus disorder prediction 101 140 - -
Bva06g01494 541 MobiDBLite consensus disorder prediction 1 47 - -
Bva06g01494 541 ProSiteProfiles SWIB/MDM2 domain profile. 322 399 IPR003121 -
Bva06g01494 541 CDD SWIB_like 329 397 - -
Bva06g01494 541 Gene3D SWIB/MDM2 domain 319 404 IPR036885 -
Bva06g01494 541 SMART swib_2 323 402 IPR019835 -
Bva06g01494 541 MobiDBLite consensus disorder prediction 1 49 - -
Bva06g01494 541 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 99 538 - -
Bva06g01494 541 Pfam SWIB/MDM2 domain 326 397 IPR003121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01494 Bva-Chr6 10824485 10827756 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Bva06g01494 SWIB 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01494 K11650 - jre:108994354 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01494 06 10824485 10827756 Bva06g01494 06 10824485 10827756 ECH