Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01488 ATGATGGCTCGCTGGGCTCGACCCGTCTATAGTGGCGCCGGCACTACTCACCATCCCTTCGGAAGAAGAAACCCCCTGCTGCCTTTTTGCTCAAGCCAACACAATACCAAGTTACTTCTATCgggtattttctttttctcatcgACGACAGAGCCAGATCTCATACTGCGATTCTTATTCTACCGAAACCGttttgcaATCATGAAGCTTGATACCAGCGGTCTCGAATCGTTTTCTACACAACTTGGACCCTTCATTGATGTTGTTGAGGAAATTTCATCTGCCCCTTCGTTCGAGCTTCCGAATACAACTCATTTCGATGACTTCCAGAAAGAAGCTATTCAGATGGTGAAGCCCGCAAAGGGTACAACTActcttgcttttatttttaaggagGGAGTCATGGTGGCAGCTGATTCCCGAGCTAGCATGGGAGGATATATATCATCTCAGTCTGtgaagaaaattattgaaattaatcCATATATGCTTGGGACAATGGCTGGAGGAGCTGCCGATTGCCAATTTTGGCACAGAAATCTTGGGATCAAATGCCGGTTGCATGAATTGGCAAATAAACGAAGAATTTCAGTAACTGGAGCATCAAAGCTACTTGCAAATATCTTATACTCTTACCGTGGAATGGGTTTGTCTGTTGGTACCATGATTGCTGGATGGGACGAAACGGGTCCTGGTCTGTATTATGTTGATAGCGAAGGAGGAAGACTGAAAGGCACTCGATTCTCTGTTGGATCTGGTTCTCCATATGCTTATGGTGTATTAGACAGCGGGTACCGATATGACTTGTCGGTTGAAGAGGCTGCTGAACTGGCTCGACGAGCAATTTATCATGCTACATTTCGTGATGGAGCTAGTGGTGGAGTTGCTAGCGtaTACCATGTGGGGAAAAACGGATGGAAGAAATTGTCCGGCGATGATGTTGGTGAACTTCATTACAAATACTATCCTGTCATCCCAAGTACTGTTGAACAAGAAATGGTTGAGGCACCTGGAGCTTG 1019 0.4298 MMARWARPVYSGAGTTHHPFGRRNPLLPFCSSQHNTKLLLSGIFFFSSTTEPDLILRFLFYRNRFAIMKLDTSGLESFSTQLGPFIDVVEEISSAPSFELPNTTHFDDFQKEAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYHVGKNGWKKLSGDDVGELHYKYYPVIPSTVEQEMVEAPGA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01488 339 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 123 328 IPR029055 -
Bva06g01488 339 CDD proteasome_beta_type_5 123 310 - -
Bva06g01488 339 PANTHER PROTEASOME SUBUNIT BETA 96 338 - -
Bva06g01488 339 PRINTS Proteasome component signature 130 145 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g01488 339 PRINTS Proteasome component signature 251 262 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g01488 339 PRINTS Proteasome component signature 287 298 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g01488 339 PRINTS Proteasome component signature 262 273 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g01488 339 ProSitePatterns Proteasome beta-type subunits signature. 126 173 IPR016050 GO:0005839|GO:0051603
Bva06g01488 339 ProSiteProfiles Proteasome beta-type subunit profile. 122 301 IPR023333 -
Bva06g01488 339 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 96 338 - -
Bva06g01488 339 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 116 321 IPR029055 -
Bva06g01488 339 Pfam Proteasome subunit 121 301 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01488 Bva-Chr6 10786852 10790566 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01488 K02737 - gmx:100779240 504.597