Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01485 ATGGCTCACCTGAAGGCAATTTCGCCATATTCATGCTCCAACCTGGCTCCTTACGGCCAAAAAAAAGAGCAGCTGATGCATCACCAGTTTTGGAAGGCGAAGCCCGTATCATTTAAGGAGTTTGGGACGACAAGAAGTGCTGGCGTCAAAAAACCTCAAGGTCATGCAATTATAAGAGCAGCGTTACGCAGTGATATGGAGAAAGTAATTTCTGAATCCAAGAAGGGTAGCGGGCTGCATGGAAAACTGGAGAAGGTCGTGCTAGCTTATAGTGGTGGCTTAGACACATCAGTCATTGTCCCATGGTTAAGAGAGAATTATGGTTGTGATGTCGTTTGCTTCACTGCTGATGTTGGCCAAGGCATAAAAGAGTTGGAAGGTTTAGAGGAAAAGGCCAAAGCTAGTGGGGCTTCTCAGTTAGTGGTTAAGGATTTGAAGGAGGAATTTGTTAGAGATTACATCTTCCCTTGTTTGCGTGCTGGTGCAATTTATGAGAGAAAGTATTTGCTTGGGACATCAATGGCACGCCCTGTTATTGCGAAGGTCATGGTTGATGTTGCCAAAGAAGTTGGAGCTGATGCTGTCTCTCATGGTTGTACAGGGAAAGGAAATGATCAGGTTCGGTTTGAGCTCACTTTCTTTGCTCTGAATCCCAAGCTACAAGTTGTGGCTCCATGGAGGGAATGGGATATTACTGGCAGAGAAGACGCGATTGAGTATGCTAAGAAGCATAATGTGCCTGTTCCTGCAACGAAGAAATCTATATACAGCAGGGACCGAAACCTTTTGCACCTTAGCCACGAGGGTGATATTCTGGAAGACCCAGCAAATGAGCCGAAGAAGGATATGTATATGATGTCTTCAGACCCAGAAGATGCTCCAGATCAAGCAGAATATATTGAAATTGGTATAGAGGCTGGGCTTCCTGTTTCAGTCAATGGGAAGAAGCTTTCACCAGCATCACTTCTTACTGAGCTCAATGATATTGGTGGTAAACATGGAATTGGCCGGGTTGACATGGTTGAAAATCGGCTGGTTGGTATGAAGAGCCGTGGTGTGTATGAAACTCCAGGCGGCACCATCCTCTTCATAGCGGCACGTGAGTTAGAGTCTTTGACACTTGATCGAGAGACAATCCAGGTGAAAGATTCCTTAGCCCTTAAATATGCAGAACTGGTGTATGCTGGCAGATGGTTTGACCCACTTCGCGAGTCCATGGATGCCTTCATGGAGAAGATCACAGAGACCACAATAGGCTCTGTCACTCTGAAGTTGTACAAAGGTTCGGTCACTGTAACTGGTCGGAAGAGCCCTCATAGCCTGTATAGGCAAGACATTTCATCGTTTGAGAGTGGACAGATATACGATCAAGCTGATGCTGCTGGGTTTATTCGGCTTTATGGTCTCCCAATGAGGGTCCGAGCAATGCTTGAGCAGGGAGTCtg 1445 0.4609 MVGWDKKFGTTRSAGVKKPQGHAIIRAALRSDMEKVISESKKGSGLHGKLEKVVLAYSGGLDTSVIVPWLRENYGCDVVCFTADVGQGIKELEGLEEKAKASGASQLVVKDLKEEFVRDYIFPCLRAGAIYERKYLLGTSMARPVIAKVMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLQVVAPWREWDITGREDAIEYAKKHNVPVPATKKSIYSRDRNLLHLSHEGDILEDPANEPKKDMYMMSSDPEDAPDQAEYIEIGIEAGLPVSVNGKKLSPASLLTELNDIGGKHGIGRVDMVENRLVGMKSRGVYETPGGTILFIAARELESLTLDRETIQVKDSLALKYAELVYAGRWFDPLRESMDAFMEKITETTIGSVTLKLYKGSVTVTGRKSPHSLYRQDISSFESGQIYDQADAAGFIRLYGLPMRVRAMLEQGV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01485 448 TIGRFAM argG: argininosuccinate synthase 52 441 IPR001518 GO:0004055|GO:0005524|GO:0006526
Bva06g01485 448 ProSitePatterns Argininosuccinate synthase signature 2. 165 176 IPR018223 GO:0004055|GO:0005524|GO:0006526
Bva06g01485 448 ProSitePatterns Argininosuccinate synthase signature 1. 56 64 IPR018223 GO:0004055|GO:0005524|GO:0006526
Bva06g01485 448 Gene3D Single helix bin 422 448 - -
Bva06g01485 448 Pfam Arginosuccinate synthase 54 440 IPR001518 GO:0004055|GO:0005524|GO:0006526
Bva06g01485 448 Hamap Argininosuccinate synthase [argG]. 50 446 IPR023434 GO:0004055
Bva06g01485 448 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 51 215 - -
Bva06g01485 448 Gene3D HUPs 52 221 IPR014729 -
Bva06g01485 448 SUPERFAMILY Argininosuccinate synthetase, C-terminal domain 220 446 IPR024074 GO:0004055
Bva06g01485 448 Gene3D Argininosuccinate synthetase, chain A, domain 2 112 402 IPR024074 GO:0004055
Bva06g01485 448 CDD Argininosuccinate_Synthase 53 437 IPR023434 GO:0004055
Bva06g01485 448 PANTHER ARGININOSUCCINATE SYNTHASE 49 447 IPR001518 GO:0004055|GO:0005524|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01485 Bva-Chr6 10765051 10769896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01485 K01940 - gmx:100816038 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01485 06 10765051 10769896 Bva06g01485 06 10765051 10769896 ECH