Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01481 ATGGCGTTATACCTACTTTACGAGTCTGCTTCCGGGTTCGCTCTTTTGCATGCTCATGGACTTGATGAAATTGGACAGAACGTCGAAGCTGTTAGGAACTCTGTTTCTGACTTGAACAGGTTCGGGAAGGTCGTGCAGCTTATGGCTTTTAATCCTTTTGAGTCTGCTCTTGATGCCCTTAAGCAGTGCAACTCCGTCTCTGAAGGCTTATTGACCGATGAACTGAGAAGTTTTCTGGAGATCAATCTACCTAAAGTCAAGGAAGGTAAGAAGGCAAAGTTTAGTTTAGGAGTAGCAGATCCTAAAATTGGTTCACAGATATCTGAAGTGACTAAAATTCCTTGCCAAAGTAATGAGTTTGTCAATGAGCTACTTCGTGGCGTGCGGCTTCATTTTGATAGGTTTATCAAGGATCTTAAGCCAGGAGATTTGGAGAAGGCCCAACTTGGCCTGGGGCATAGTTATAGCAGGGCAAAGGTGAAATTTAATGTAAATCGAGTTGACAACATGGTCATTCAGGCAATCTTCCTTCTTGATACACTTGATAAGGATATCAATTCCTTCTCCATGAGAGTCAGAGAATGGTACTCGTGGCATTTTCCTGAGTTGGTGAAGATTGTAAGTGATAATTATCTGTATGCCAAAGTTGCAAAATATATTGAGGACAAGTCAAAGTTGTCGGAAGATAAAATCCCAGAGTTAACAGAGATAATAGGAGATGAAGATAAGGCTAAAGAGATTGTGGAAGCTGCCAAGGCATCCATGGGACAGGATTTGTCCCCAGTTGACTTGATCAATGTCCAGCAATTTGCACAGAGGGTAATGGACCTCTCTGAGTATAGAAGGAAGCTTTATGATTATCTTGTTACTAAGATGAACGACATTGCACCAAATTTGGCCTCTCTGATTGGTGAAGTTGTTGGTGCTCGTTTGATTTCTCATGCTGGTAGTCTTACAAATTTGGCCAAGTGCCCCTCTTCTACTCTTCAAATCCTTGGTGCAGAAAAGGCATTGTTCAGGGCGTTGAAAACCAGAGGAAACACTCCCAAATATGGTCTGATTTTCCATTCATCCTTTATTGGTCGGGCATCTGCCAGAAATAAGGGCCGAATGGCCCGCTTTCTTGCAAACAAGTGCTCGATTGCTTCACGTATTGACTGCTTTTCTGAGACGGGTACTACCGCTTTTGGGGAGAAACTCAAAGAACAAGTGGAGGAGCGACTTGACTTCTATGATAAGGGAGTTGCCCCTCGTAAGAACATAGATGTCATGAAGGCTGCCATTGAAAGTGCAGAAGACAAAGATACAGCAAAGGAAACAGAAGAAGTGCACGTTGAACCCACAAGCAAGAAAGGCAAGAAGTCAAAAGCTGCTGCTAATGATGGTGAGGATATGGTTATAGATAAGTCCACAGCCATTACAAATGGCGGTGATGCTTTGGAGGAGCataaatcagaaaagaaaaagaagaagaaagaaaagaggaaattgGACAATGAGATGGACGTTGACAATGAAGATGGTGCCAATGGGGTTGCTCACGAGGAAGATGGAGatgtagaaaagaagaagaaaaagaagaaagataaaatgaatgaCGATGGAGAAATATTGGGGGCTGATAAAGAgactaagaagaaaaagaagaagaaatcaaaaagtGCAGATGCGAGTAAAATTTG 1682 0.4025 MALYLLYESASGFALLHAHGLDEIGQNVEAVRNSVSDLNRFGKVVQLMAFNPFESALDALKQCNSVSEGLLTDELRSFLEINLPKVKEGKKAKFSLGVADPKIGSQISEVTKIPCQSNEFVNELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVSDNYLYAKVAKYIEDKSKLSEDKIPELTEIIGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARFLANKCSIASRIDCFSETGTTAFGEKLKEQVEERLDFYDKGVAPRKNIDVMKAAIESAEDKDTAKETEEVHVEPTSKKGKKSKAAANDGEDMVIDKSTAITNGGDALEEHKSEKKKKKKEKRKLDNEMDVDNEDGANGVAHEEDGDVEKKKKKKKDKMNDDGEILGADKETKKKKKKKSKSADASKI 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01481 560 MobiDBLite consensus disorder prediction 432 560 - -
Bva06g01481 560 SMART NOSIC_2 170 222 IPR012976 -
Bva06g01481 560 Coils Coil 480 507 - -
Bva06g01481 560 Gene3D - 141 298 - -
Bva06g01481 560 SUPERFAMILY Nop domain 163 412 IPR036070 -
Bva06g01481 560 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Bva06g01481 560 MobiDBLite consensus disorder prediction 479 543 - -
Bva06g01481 560 PANTHER BNACNNG34340D PROTEIN 1 555 - -
Bva06g01481 560 Gene3D Nop domain 299 422 IPR042239 -
Bva06g01481 560 MobiDBLite consensus disorder prediction 432 463 - -
Bva06g01481 560 MobiDBLite consensus disorder prediction 544 560 - -
Bva06g01481 560 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 555 IPR045056 GO:0030515|GO:0031428|GO:0032040
Bva06g01481 560 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Bva06g01481 560 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01481 Bva-Chr6 10751656 10754915 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01481 K14564 - gmx:100779446 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01481 06 10751656 10754915 Bva06g01481 06 10751656 10754915 ECH