Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01477 ATGTCGGGCACTGGAATTTACGTCTATCCAACACCGGCACCCGAAAAGATTGGTTCCTACTATGATGTCCCAGAAGGAGTGGACATCCGAGGAAGATACGATGAAGAATTCGCCAAAATTCTTACCAAAGATGCTCTCAAGTTCGTTGCTGACTTGCAGCGTCAGTTTAGGAACCATATCAAATACTCATTGGAGTGTAGAAGAGAAGCAAAGAGAAAGTATAATGAGGGTGCCCTACCAGTTTTTGATCCTGCAACCAGGTACATCAGAGAAACTGACTGGGTGTGTGCACCTGTTCCACCAGTTGTTGCTGATAGAAAGGTAGAGATTACAGGCCCTGTGGAACGAAAGATGATCATCAATGCTCTCAATTCTGGAGCTAAAGTCTTTATGGCTGATTTTGAGGATGCACTGTCTCCTAGCTGGGAGAATCTTATGAGAGGCCAAGTTAACTTGAGGGATGCTGTAAATGGGAGTATAAGCTTCCATGACAAAGCCAGGAACAGGGTTTATAAACTTAATGATCAGATAGCAAAGCCTTTTGTTCGTCCAAGAGGTTGGCATCTACCCGAGgctcatattttaattgatggtGAACCTGCAACCGGTTGCCTTGTTGATTTTGGCCTTTATTTCTATCACAATTATGCAACATTCCGGAGAACCCAAGGTGCAGGGTTTGGTCCCTTCTTCTATCTCCCTAAAATGGAGCATTCAAGGGAAGCCAAGATATGGAACAGCGTATTTGAGAGGGCAGAGAAGATGGCAGGCATAGAAAAAGGAAGTATCAGAGCCACTGTTCTCATTGAAACACTTCCAGCAGTGTTTCAAATGGATGAGATTCTGTATGAGCTGAGGGACCACTCGGTGGGTCTCAACTGTGGACGATGGGATTATATTTTCAGCTACGTTAAGACGTTCCAGGGTCACCCAGATCGCTTGTTACCAGACAGAGTTCAAGTTGGGATGACCCAACACTTCATGAAGAGTTACTCTGATCTTCTCATCAGGACTTGCCATAGGCGAGGTGTACACGCCATGGGAGGCATGGCAGCACAAATTCCAATTAGAGATGACCCAGTGGCTAATGAggcagctttggagctagtgagGAAGGACAAGCTAAGAGAAGTTAAGGCAGGGCATGATGGAACTTGGGCAGCACACCCTGGTCTGATTCCAACCTGCATGGAGGTCTTCAACAACAACATGGGCAACGCTCCTAATCAGATAAAAACCATGAAACGTGATGATGCAGCAAACTTGACTGAGGATGACCTCTTGCAGAGACCCAGAGGAGTTCGTACAATGGAAGGTCTCCGCCTAAATACTCGTGTGGGTATTCAGTATCTGGCAGCATGGCTCACAGGAAGTGGTTCAGTGCCTCTTTACAATCTTATGGAAGATGCGGCTACTGCCGAAATTAGCAGGGTGCAAAACTGGCAGTGGCTTAAGTATGGAGTTGAATTGGATGGAGATGGAGTTAAAGTGAACAATGAACTTTTTGGTAGAGTGGTTGAAGAGGAGATGGCTAGGATTGAGAAAGAGGTGGGCAAAGAAAAGTTCAAGAAGGGCATGTACAAGGAGGCTTGCAGGATTTTCAGTCGGCAATGCACAGCCCCAACACTTGATGATTTTCTTACCTTGGATGCTTATAATCATATAGTCATACATTATCCTGTTGGATCTTCTAAGCTTTG 1700 0.4435 MSGTGIYVYPTPAPEKIGSYYDVPEGVDIRGRYDEEFAKILTKDALKFVADLQRQFRNHIKYSLECRREAKRKYNEGALPVFDPATRYIRETDWVCAPVPPVVADRKVEITGPVERKMIINALNSGAKVFMADFEDALSPSWENLMRGQVNLRDAVNGSISFHDKARNRVYKLNDQIAKPFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFYHNYATFRRTQGAGFGPFFYLPKMEHSREAKIWNSVFERAEKMAGIEKGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDYIFSYVKTFQGHPDRLLPDRVQVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIRDDPVANEAALELVRKDKLREVKAGHDGTWAAHPGLIPTCMEVFNNNMGNAPNQIKTMKRDDAANLTEDDLLQRPRGVRTMEGLRLNTRVGIQYLAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDGVKVNNELFGRVVEEEMARIEKEVGKEKFKKGMYKEACRIFSRQCTAPTLDDFLTLDAYNHIVIHYPVGSSKL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01477 566 Gene3D Malate synthase, domain III 434 556 IPR044856 -
Bva06g01477 566 PIRSF Malate_synth 19 557 IPR006252 GO:0004474|GO:0006097
Bva06g01477 566 Pfam Malate synthase 28 556 IPR001465 GO:0004474|GO:0006097
Bva06g01477 566 PANTHER MALATE SYNTHASE 20 566 IPR006252 GO:0004474|GO:0006097
Bva06g01477 566 Gene3D Malate synthase, domain 3 23 433 IPR046363 -
Bva06g01477 566 TIGRFAM malate_syn_A: malate synthase A 40 555 IPR006252 GO:0004474|GO:0006097
Bva06g01477 566 ProSitePatterns Malate synthase signature. 286 301 IPR019830 GO:0004474|GO:0006097
Bva06g01477 566 PANTHER MALATE SYNTHASE 20 566 - -
Bva06g01477 566 CDD malate_synt_A 40 556 IPR006252 GO:0004474|GO:0006097
Bva06g01477 566 SUPERFAMILY Malate synthase G 13 557 IPR011076 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01477 K01638 - gmx:732628 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01477 06 10740142 10742279 Bva06g01477 06 10740142 10742279 ECH