Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01463 ATGATCAAATCAACcttctctcccattttctgGCTGCTGCCCAAATCTCCAAAACTATTTCAGCACACAATCACCAATAACTTGACAAACCGCGCAGCAGGTGTTCGACAAAATGCCACGCTGGAGCACCCCATCAGAATTCCTCCCGTCCTATCGCCCCCTACTTCTGCTTACATTCACCTCCCTTTCTGTCGAAAACGTTGCCATTACTGTGACTTCACAATCGTTGCTCTTGGCTCCGCTTCAACCCAATTGGACGATGACCCACGAGTATTAAATTACATACAATTGCTCTGTAGAGAAATCAATGCAACAAAAGTAGAATTCGATACCAAGCCACCTCTTGAAACGGTCTTTTTTGGGGGAGGGACGCCCTCGCTTGTGTCGCCAAAGATGGTTTCCTCTATCTTAGAAACTTTGAATACGAAATTTGGATTGCGCATGAATGCTGAAATATCAATGGAAATGGATCCGGGGACATTTGATGCCAAGAAGATGCGGGAGATGATGAAATTGGGAGTTAACAGAGTGTCTTTGGGAGTTCAAGCATTTCAAGAGAAGTTGTTGAGGGCTTGTGGGAGGGCACATGGTCTGATGGAGGTTTATGAAGCTATTGATATTATCAAAACATGTGGGGTTGAGAATTGGAGTATAGACCTCATATCTTCACTGCCTCATCAAACATCTGACATGTGGGAGGAGAGTCTAAGGCTCACCATTGAGGCACAGCCCACTCATGTTTCAGTATATGATTTGCAGATTGAACAAGGCACAAAATTTGGAACACTGTATACACCAGGGGAATTTCCACTGCCTTCTGAGACAGAGTCAGCTGAATTCTATAAAATGGCTTCAAGCATGCTTTCTAGTGCAACTTACAATCATTACGAAATTAGCAGTTACTGCAAGACTGGATATGAGTGCAAACACAATTATACCTACTGGAAGCATAAGCCTTTCTATGGATTTGGCCTCGGGTCTACTAGTTTTGTTGTTGGATTGAGGTTTTCAAGACCAAGGAAGATGAATGATTACATGAACTTTGTGCAAAATTTGGAAAACGGGTTAGTAAATAGCCCTGTTAATGCCAGCATTCATCCCAAGGATACAGCTATGGATGTTTTCATGCTATCGCTGAGAACTGCAAGAGGCCTAGACTTGAAGTCTTTCCGAGAATCATTTGGCACCTCTAttatttcctctcttttcGAAGCTTATAAACCTTACTTTGAGAGCGGACATGTGGTTTGCTTGAACGAGGAGAGGAGAGCCGTTGGAACAGAAGACCTCAACACTTatttattagaagaaaatcaCACGCCCGCTAAACTGGCTTACTTACGGCTAAGTGATCCAGAAGGCTTCCTCTTATCAAATGAGCTAATATCCATTGCTTTCAAGGCCATGGACTctttagaaattta 1424 0.4157 MIKSTFSPIFWLLPKSPKLFQHTITNNLTNRAAGVRQNATLEHPIRIPPVLSPPTSAYIHLPFCRKRCHYCDFTIVALGSASTQLDDDPRVLNYIQLLCREINATKVEFDTKPPLETVFFGGGTPSLVSPKMVSSILETLNTKFGLRMNAEISMEMDPGTFDAKKMREMMKLGVNRVSLGVQAFQEKLLRACGRAHGLMEVYEAIDIIKTCGVENWSIDLISSLPHQTSDMWEESLRLTIEAQPTHVSVYDLQIEQGTKFGTLYTPGEFPLPSETESAEFYKMASSMLSSATYNHYEISSYCKTGYECKHNYTYWKHKPFYGFGLGSTSFVVGLRFSRPRKMNDYMNFVQNLENGLVNSPVNASIHPKDTAMDVFMLSLRTARGLDLKSFRESFGTSIISSLFEAYKPYFESGHVVCLNEERRAVGTEDLNTYLLEENHTPAKLAYLRLSDPEGFLLSNELISIAFKAMDSLEI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01463 474 ProSiteProfiles Radical SAM core domain profile. 49 291 IPR007197 GO:0003824|GO:0051536
Bva06g01463 474 Pfam Radical SAM superfamily 59 238 IPR007197 GO:0003824|GO:0051536
Bva06g01463 474 Gene3D tm_1862 like domain 62 266 IPR023404 -
Bva06g01463 474 SUPERFAMILY Radical SAM enzymes 43 418 - -
Bva06g01463 474 PANTHER RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 1, MITOCHONDRIAL 27 468 - -
Bva06g01463 474 SFLD HemN-like, clustered with heat shock genes 54 421 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Bva06g01463 474 TIGRFAM hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 56 404 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Bva06g01463 474 PANTHER COPROPORPHYRINIGEN III OXIDASE 27 468 IPR034505 -
Bva06g01463 474 SMART MiaB 54 283 IPR006638 GO:0003824|GO:0051536
Bva06g01463 474 SFLD Radical SAM 54 421 IPR007197 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01463 - K07739 gmx:100779022 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01463 06 10675665 10677428 Bva06g01463 06 10675665 10677428 ECH