Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01455 ATGAAACGATTCTTTCAAGCGGTGGAAAAGGATGGGTCTTCGAAGAAGCCCTCTGTTTCAAGTTCAAGAGAAAACGGTGAGAGCACAGAAACATCTAGGGAGGAGGAGACGAAAGAGCCATCCAAGTTCTTGACTTGGAATGCCAACAGCCTTTACCTTCGAGTCAAGAACAACTGGTCCGAGTTCAGCAAGTTCGTCATGAGTTTTGACCCCGATGTCATTGCAATACAGgaaGTGAGGATGCCTGCCGCTGGTTCGAAAGGTGCACCTAAAAGTCCAGGAGAGTTGAAGGATGATACAAACCCCTCTAGACAAGAAAAGCAGACATTAATGCGTGCACTTTCAAGTCCACCTTTTGGAAATTATCGTGTTTGGTGGTCTCTTGCAGATTCAAAATATGCAGGGACCGCACTCTTTGTAAAAAAATGCTTCAAGccaaaaagtgtttttttcaATCTTGATAAGATAGcTTCAAAGCATGAGCCAGATGGCCGAGTTATCTTGGTTGAATTTGAGACATTTCGTCTGTTGAATACATATGCACCAAATAATGGGTGGAAAGAGGAGGAGAACTCATttcaaaggagaagaaaatgggaCAAAAGGATTCTAGAGTTTGTTAAGCAATATTCTGATAAACCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATTGATGTGAGTCATCCAGAGTTTTTCAGTGCAGCAAAACAAAATGGTTATGTTCCTCCGAATAAAGAGGATTGCGGGCAGCCTGGATTTACCTTGGCTGAAAGAAAACGTTTTGGTAACATCTTAAGAGAGGGAAAGCTGGTAGATGCCTATAGGTTTCTGCATCCAGAGAAAGACATGGAACGAGGTTTTTCATGGTCTGGAAACCCAGTGGGAAAGTATCGTGGAAAAAGGATGAGAATAGACTATTTTATAGTTTCAGAAGCTCTAAAAGAGAAGATTGTTTCTTGTGAATTGCATGGACAAGGGATAGAATTACAAGGCTTCTATGGGAGCGACCACTGCCCAGTCAGCCTGGTACTCTCCGCGAACTCCAGCTTTCAAAACGAGAATCcaactta 1082 0.4094 MKRFFQAVEKDGSSKKPSVSSSRENGESTETSREEETKEPSKFLTWNANSLYLRVKNNWSEFSKFVMSFDPDVIAIQEVRMPAAGSKGAPKSPGELKDDTNPSRQEKQTLMRALSSPPFGNYRVWWSLADSKYAGTALFVKKCFKPKSVFFNLDKIASKHEPDGRVILVEFETFRLLNTYAPNNGWKEEENSFQRRRKWDKRILEFVKQYSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKQNGYVPPNKEDCGQPGFTLAERKRFGNILREGKLVDAYRFLHPEKDMERGFSWSGNPVGKYRGKRMRIDYFIVSEALKEKIVSCELHGQGIELQGFYGSDHCPVSLVLSANSSFQNENPT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01455 360 Gene3D Endonuclease/exonuclease/phosphatase 5 350 IPR036691 -
Bva06g01455 360 SUPERFAMILY DNase I-like 42 348 IPR036691 -
Bva06g01455 360 MobiDBLite consensus disorder prediction 1 41 - -
Bva06g01455 360 MobiDBLite consensus disorder prediction 27 41 - -
Bva06g01455 360 MobiDBLite consensus disorder prediction 84 106 - -
Bva06g01455 360 PANTHER AP ENDONUCLEASE 29 351 IPR004808 GO:0004518|GO:0006281
Bva06g01455 360 CDD Ape1-like_AP-endo 42 348 - -
Bva06g01455 360 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 29 351 - -
Bva06g01455 360 ProSiteProfiles AP endonucleases family 1 profile. 41 350 IPR004808 GO:0004518|GO:0006281
Bva06g01455 360 Pfam Endonuclease/Exonuclease/phosphatase family 44 341 IPR005135 GO:0003824
Bva06g01455 360 TIGRFAM xth: exodeoxyribonuclease III (xth) 42 348 IPR004808 GO:0004518|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01455 Bva-Chr6 10604799 10610035 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01455 - - fve:101300146 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01455 06 10604799 10610035 Bva06g01455 06 10604799 10610035 ECH