Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01454 ATGGCATCAACCACCGTCTCCATTTCCTCTGCTACATTCATTTGCAGAACAGCTTCCCCTAAGACCTCGTTGGCAAGCTTTAAACTCAATCGccatgaagaaattttatcatcCCCTCTAATGGGTACAAAACCAATTAGTCTGAAAATGTCAAGAGCTTTACCAGCTAGAATGCCCAGTATTTCTACTCGGTTTAGTTGCTCAGCGTCTTCCTCCTCTACTCTTCCATCAGCTCTTCTATTTGATTGTGACGGCGTGCTCGTTGACACTGAGAAAGATGGACACCGGGTATCTTTTAATGAAACTTTCGAAGAGAGGGAATTAGGCGTTACCTGGTATGTAGACTTGTATGGGGAGTTGCTCAAAATTGGAGGTGGGAAAGAGAGGATGACGGCGTACTTTAACAAGACAGGTTGGCCGGAGAAAGCACCAGAtagtgaagaagaaagaaaagaatttatcGCTTCACTTCATAAGAGGAAGACAGAACTGTTCATGGCCCTAAttgagaagaaattgttgCCTCTTCGTCCAGGAGTTGCAAAGTTGATTGATCAAGCTTTAGCTCAAGGAGTCAAAGTTGCTGTGTGCAGCACTTCCAATGAGAAGGCGGTTTCTGCAATAGTATCATTCTTACTGGGACCTCAGCGAGCTGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGCAAAAAGCCTGATCCAGCTATATATCAATTAGCAGCCACTACTCTGGACGTTGATCCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATTGGCCTAGCAGCTGCCAAAGGAGCCGGAATGAAGTGTATAATAACAAAGAGCGGCTACACAGCAGATGAAGAATTCTCAAACGCTGATGCGGTCTTTGACTTCATTGGAGATCCTCCTGAGGAGCGATTTGACTTGGCATTCTGTGCAAGCCTTCTGGAGAAGCAATTTGTGAGCTA 959 0.4286 MASTTVSISSATFICRTASPKTSLASFKLNRHEEILSSPLMGTKPISLKMSRALPARMPSISTRFSCSASSSSTLPSALLFDCDGVLVDTEKDGHRVSFNETFEERELGVTWYVDLYGELLKIGGGKERMTAYFNKTGWPEKAPDSEEERKEFIASLHKRKTELFMALIEKKLLPLRPGVAKLIDQALAQGVKVAVCSTSNEKAVSAIVSFLLGPQRAEKIKIFAGDVVPRKKPDPAIYQLAATTLDVDPSRCVVVEDSAIGLAAAKGAGMKCIITKSGYTADEEFSNADAVFDFIGDPPEERFDLAFCASLLEKQFVS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01454 319 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 159 275 IPR006439 -
Bva06g01454 319 Gene3D Putative phosphatase; domain 2 90 174 IPR023198 -
Bva06g01454 319 SFLD Haloacid Dehalogenase 74 302 - -
Bva06g01454 319 Pfam Haloacid dehalogenase-like hydrolase 79 275 IPR041492 -
Bva06g01454 319 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 58 317 IPR044999 GO:0016787
Bva06g01454 319 CDD HAD_CbbY-like 81 278 - -
Bva06g01454 319 SFLD phosphoglycolate phosphatase 74 302 - -
Bva06g01454 319 Gene3D - 78 294 IPR023214 -
Bva06g01454 319 PANTHER CBBY-LIKE PROTEIN 58 317 - -
Bva06g01454 319 SUPERFAMILY HAD-like 77 295 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01454 Bva-Chr6 10600915 10604221 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01454 - - fve:101296207 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01454 06 10600915 10604221 Bva06g01454 06 10600915 10604221 ECH