Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01453 ATGGCTGAGCCGACAGAACCCCAACAGCTAGTATCGCCTCCAAAACCACAGTTGGGAGCAGTAGAGAGCTCCACAGAAGAGAGCTTGAAGACTATCAATCCTACCAAGGTTGTCGTTTTAGCTGACCTTAACGTTGATCCTCCTGAAGCAGAGGAGGATGATTCCGCTCCTGTTTCTGCTCCAGAAATTACCAGgtTAACCAACAATGAGAACGACCAAGATAAGAGTATGTCATCCAAAGACACTGATAGCATTGAAGGCGAAGGTAAGAAGTTGAATAAGCAGGGGAAGTGCCGCTCCAGACTTAGCAAAGCAGATTCTTCTCTTGATTGTGGAGCTGATGCAGATGGGGATCAGCATGCTCAAGGGGTTGCTTCCTCTCGGGAGGAAAAAGTTAGCAGCCTGAAGACAGGCTTGGTTCATGTTGCCAGGAAGATGCCCAAAAATGCTCATGCTCATTTTATACATGGTCTGATGCACCAAAGGTTTGGCCAACCTCAAAAGGCTGTATCGGCTTATGAAAAGGCTGCAGAAATCTTACTTCGTTCTGAGGCTGAGATCAGTCGGCCAGAGTTGCTTTCTTTAGTTCAGATTCACCATGCACAGTGCTTGATTCTAGAAAGTTCATCAGAGAATAGCACAGATAAAGAACTTGAACCTCAAGAACTCGAAGAAATTCTTTCAAAACTGAAAGAGTCCGTGCAATCAGATATAAGACATGCAGCTGTATGGAATACACTAGGTTATATGCTTCTTAAAACTGGTCGCTTGCAGAGTGCTATCTCAGTTTTGTCATCATTGTTGACCATTTCACCAGACAACTATGATTGCTTAGGAAACCTTGGGATTGCTTACCTCCAACGTGGGGAGTTGGAATTATCTGCAAAATGTTTCCAGGAATTGATTCTGAAAGATCAAAACCATCCTGCAGCTTTAATAAACTACGCTTCCCTTCTATTGTGTAAATATGCATCAGTTGTTGCAGGTGCTGGCGCAAGTGCTGCAGAGAGTACTTCTACAGATCAAGTCATGGCTATTAATGTTGCTAAGGAATGTTTGCTAGCTGCAACTAAAGCAGACGCCAAGTCAGCACATATTTGGGCAAATCTTGCAAACGCATTTTATATGAGTGGTGATCATAGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTGGAGCCCAATTGCATGTCTACTCGATATACTGTTGCTACCCATCGAATAAAGGATGCAGAAAGGTCACAAGATCCTAGTGAACAACTTTCATGGGCTGGAAATGAGATGGCTTCTATAATAAGAGATGGAGATTCGTCCCTGGTTGAGCTTCCAATATCATGGGCTGGGCTTGCCATGGTTCACAAGGCTCAGCATGAGATATCAGCAGCATTTGAAACTGAACAGCATGAGCTGATGGAAGTTGAGGAACGTGCTGTTTGCAGTTTAAAGCAGGCTTTAGCAGAAGATCCAGATGATGCTGTGCAGTGGCATCAGCTTGGCCTTCATAGCCTCTGTACTCGGCAATTCAAAACATCACAAAGGTACCTTAAAGCTGCTGTCGCCCGTGACAAGGATTGCAGCTATGCATGGTCAAACCTAGGTGTCTCGCTTCAACTATCAGAGGAACCATCACAAGCTGAAGAAGTATACAAGCGGGCCTTGGCATTAGCAACAACTCAACAAGCACATGCTATATTTTCTAATCTAGGCAATCTCTATCGCCAACAGAAACAATATGAACGTGCCAAGGCTATGTATACGAAGTCACTTGAGCTACAACCTGGCTATGCTCCTGCATATAACAATCTTGGTCTTGTCTTTGTTGCTGAGGGTTTGTTGGAAGAGGCCAAATATTGTTTTGACAAGGCTCTTCAATCAGATCCATTGCTGGACGCTGCCAAGTCAAACATGATTAAAGTGGTTGCCATGTCAAAGTTATGCAGAGGTCTCTCCTCATGCCCTCTCAAAGAATG 1973 0.443 MAEPTEPQQLVSPPKPQLGAVESSTEESLKTINPTKVVVLADLNVDPPEAEEDDSAPVSAPEITRLTNNENDQDKSMSSKDTDSIEGEGKKLNKQGKCRSRLSKADSSLDCGADADGDQHAQGVASSREEKVSSLKTGLVHVARKMPKNAHAHFIHGLMHQRFGQPQKAVSAYEKAAEILLRSEAEISRPELLSLVQIHHAQCLILESSSENSTDKELEPQELEEILSKLKESVQSDIRHAAVWNTLGYMLLKTGRLQSAISVLSSLLTISPDNYDCLGNLGIAYLQRGELELSAKCFQELILKDQNHPAALINYASLLLCKYASVVAGAGASAAESTSTDQVMAINVAKECLLAATKADAKSAHIWANLANAFYMSGDHRSSSKCLEKAAKLEPNCMSTRYTVATHRIKDAERSQDPSEQLSWAGNEMASIIRDGDSSLVELPISWAGLAMVHKAQHEISAAFETEQHELMEVEERAVCSLKQALAEDPDDAVQWHQLGLHSLCTRQFKTSQRYLKAAVARDKDCSYAWSNLGVSLQLSEEPSQAEEVYKRALALATTQQAHAIFSNLGNLYRQQKQYERAKAMYTKSLELQPGYAPAYNNLGLVFVAEGLLEEAKYCFDKALQSDPLLDAAKSNMIKVVAMSKLCRGLSSCPLKE 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01453 657 ProSiteProfiles TPR repeat region circular profile. 597 628 - -
Bva06g01453 657 Pfam Tetratricopeptide repeat 529 558 IPR019734 GO:0005515
Bva06g01453 657 ProSiteProfiles TPR repeat profile. 597 630 IPR019734 GO:0005515
Bva06g01453 657 Pfam Tetratricopeptide repeat 564 625 - -
Bva06g01453 657 Gene3D Tetratricopeptide repeat domain 476 561 IPR011990 GO:0005515
Bva06g01453 657 Pfam Tetratricopeptide repeat 251 310 - -
Bva06g01453 657 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 23 654 - -
Bva06g01453 657 Gene3D Tetratricopeptide repeat domain 92 337 IPR011990 GO:0005515
Bva06g01453 657 SMART tpr_5 493 526 IPR019734 GO:0005515
Bva06g01453 657 SMART tpr_5 241 274 IPR019734 GO:0005515
Bva06g01453 657 SMART tpr_5 527 560 IPR019734 GO:0005515
Bva06g01453 657 SMART tpr_5 563 596 IPR019734 GO:0005515
Bva06g01453 657 SMART tpr_5 275 308 IPR019734 GO:0005515
Bva06g01453 657 SMART tpr_5 150 183 IPR019734 GO:0005515
Bva06g01453 657 SMART tpr_5 597 630 IPR019734 GO:0005515
Bva06g01453 657 SMART tpr_5 364 397 IPR019734 GO:0005515
Bva06g01453 657 MobiDBLite consensus disorder prediction 74 104 - -
Bva06g01453 657 Gene3D Tetratricopeptide repeat domain 562 640 IPR011990 GO:0005515
Bva06g01453 657 ProSiteProfiles TPR repeat profile. 241 274 IPR019734 GO:0005515
Bva06g01453 657 ProSiteProfiles TPR repeat profile. 364 397 IPR019734 GO:0005515
Bva06g01453 657 SUPERFAMILY TPR-like 473 634 IPR011990 GO:0005515
Bva06g01453 657 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 23 654 - -
Bva06g01453 657 MobiDBLite consensus disorder prediction 1 132 - -
Bva06g01453 657 Gene3D Tetratricopeptide repeat domain 345 433 IPR011990 GO:0005515
Bva06g01453 657 ProSiteProfiles TPR repeat profile. 563 596 IPR019734 GO:0005515
Bva06g01453 657 SUPERFAMILY TPR-like 147 400 IPR011990 GO:0005515
Bva06g01453 657 MobiDBLite consensus disorder prediction 18 32 - -
Bva06g01453 657 Pfam Tetratricopeptide repeat 364 397 IPR019734 GO:0005515
Bva06g01453 657 ProSiteProfiles TPR repeat region circular profile. 563 594 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01453 514 637 Glycosyltransferase AT3G04240 29.032 5.20e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01453 - - gmx:100820184 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01453 06 10595381 10600379 Bva06g01453 06 10595381 10600379 ECH