Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01438 ATGCCTGTGTCCCCCGCTTTAGCGTATGGTTGCCGCTACTCTTGTGCGAATGCAAGCCCTCTAAGACACCTTTTGATCTCAACTCTGTTGCATCATCACAAGCGCACTGTATCAGCAGCGGCTCACTCTGCCATTATCACTAGCCtcttcttttctccatttttcccAAAATCCAATTTCCTCACGGGAAACACTCTATTCTCTCGGATGGAGCAATTCTGGTCTGGTAGTGGCGTCAATAAGAACAAAGGGATGGTGGAGAATCTGCAGCGTTATGGAGTGATAACATCACAAAAGGTAGCAGAAGTCATGGAGACAGTGGATAGGGCTTTGTTTGTACCCGATGGAGCCCCAGCTTATGTTGACAGCCCCATGCCAATAGGGTACAACGCCACTATATCTGCACCTCATATGCACGCCACATGCCTTCAGTTACTGGAGAAGAATTTGCAGCCTGGGATGCATGCTCTGGATGTTGGCTCTGGAACGGGGTATCTGACCGCATGCTTTGCCTTGATGGTTGGACCTCAGGGCCGTGCTGTTGGTGTGGAACATATCCCTGAATTGGCTTCTTCTTCAATAGAGAATATCCAGAAGAGTGCTGCAGCTCCACTACTGAAAGACGGGTCTCTCTCAGTGCACGTTGGTGATGGAAGGCAAGGGTGGCCGGAGTTTTCTCCTTATGATGCCATTCATGTCGGAGCAGCGGCACCAGAAATCCCACAACCGCTGATTGACCAGTTGAAACCTGGAGGTAGAATGGTAATTCCTGTTGGAAACATATTTCAGGATTTGAAGGTTGTGGATAAGAAGTCAGATGGTTCTATCTCTGTTCGGACTGAGACCTCTGTTCGATACGTGCCTCTCACCAGTCGAGAAGCTCAACTGCGAGGCTACTG 899 0.4839 MPVSPALAYGCRYSCANASPLRHLLISTLLHHHKRTVSAAAHSAIITSLFFSPFFPKSNFLTGNTLFSRMEQFWSGSGVNKNKGMVENLQRYGVITSQKVAEVMETVDRALFVPDGAPAYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELASSSIENIQKSAAAPLLKDGSLSVHVGDGRQGWPEFSPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKKSDGSISVRTETSVRYVPLTSREAQLRGY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01438 299 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 81 293 - -
Bva06g01438 299 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 216 231 IPR000682 GO:0004719|GO:0036211
Bva06g01438 299 Gene3D Vaccinia Virus protein VP39 74 299 IPR029063 -
Bva06g01438 299 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 299 IPR000682 GO:0004719|GO:0036211
Bva06g01438 299 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 81 295 IPR000682 GO:0004719|GO:0036211
Bva06g01438 299 CDD AdoMet_MTases 157 258 - -
Bva06g01438 299 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 264 IPR029063 -
Bva06g01438 299 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01438 Bva-Chr6 10525192 10528305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01438 K00573 - jre:109000780 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00307 05 1503026 1506674 Bva06g01438 06 10525192 10528305 BWGD
Bva06g01438 06 10525192 10528305 Bva06g01438 06 10525192 10528305 ECH