Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01435 ATGATCAGTGCCCTgctgtttttggtttttgttagATTTAGCGATGTTGATGGCTCAGGCTCCGGAGGAGGAAGGCAAGGGCAATGGCAGCTTCTCCTTAACAACACTGGTGTGGTGGGTATGCACATGACTTTAACCCACCACAACACAGTGATAATGTTTGATCAAACAGGAGCTGGCGAGTCCAGTTATCGACTTCGTAAACGCTTCAATGGGAGCAGTTGCAGCAGACGCACTAATGATTTGAGGGACTCTACATGCTATGCTCACTCTGTAGAGTACGACGTTGGTGGGAACAGAGTGAGGCCTCTAAGGCTTGACACTGATCCTTGGTGTTCCTCTGGTTCTTTCCTCAGTAATGGGACTCTGCTACAAACAGGTGGGTATGGCAGTGGCGCTACAAGGGTGAGATTGTTTAGACCCTGTGATGATCACCAATGTGACTGGAAACAATCGAGGAAATCACTTTCTGATCCGCGCTGGTATGCTTCTAGCCAGAGAGTAGCAGAGCATGACAGGGTTGTTGTCGTAGGTGGGAGAGGAGTTTTCACCTATGAATTCGTACCCAAACGTGATTCTGGAGAAAAATCCTTTCTTCTTCCGTTCTTGCACCAAACTAATGACGGGAGTAAAGATGGGAACAACCTCTATCCCTTCCTTCACCTTTCATCGGACGGCAATTTGTTCATCTTCGCCAACCGTGATTCCATCCTTTTGAACTTGAGACGAAACAGAGTAATCAAGAGATTCCCTCGGATTCCAGGGGACGGGTCAAGAAATTACCCAAGCTCTGCCTCTTGTGTGCTTCTTCCATTGCACCACACAGACAATTTCACCAAGGTGGAAATTATGATCTGCGGGGGTGCAGCTACAGGGGCATCCGGGGCTGCTAACCGAGGAAGATTCTTGACGGGTTTAAGATCTTGTGGGCGAATGGTGATAACAGAGGATAAGCCCAAGTGGGCTATGGAAGACATGCCAGCACCACGTCTTCTACATGACATGCTAATCCTCCCCACTGCCCAGATCCTGATTATAAACGGAGCTAAAAGTGGGTGTGCAGGATATGACAATGCCAGAAACGCTTCTCTTCAACCTTACCTTTACAGCCCAAATAAACCACTGGGCAAAAGGTTTAGAGTGCTGAAGTCCACTAAAATACCCAGAATGTACCACTCCGCAGCAATTGTTGTTCCCGACGGAAGGGTCTTAGTTGCTGGGAGTAACCCACACGGGAGGTACACATTTCATAAAGTGACATACCCAACTGAGCTCAGACTAGAAGCATTTGTTCCTCATTACATGAACAGAAGGTACCACAGCTGGAGGCCCACTAATTTGAGTATAGAGTACGGCAGTGGCGGCGTAACAGCTGCTCATGGCATTGGGTATGGGACGGAGTTCATTGTTGGATTCTTGGTGAGGAAGAAGAACATTGAGGTAGAGTTTAGTGCGTATGCACCACCCTTTACGACGCACTCCTTCTCAATGAATCAGAGGATGTTGAAGCTGAGGTCCAAAAACATGGAGACAAGTAAAGATGGGTGGGTGAAAGCAATAGTAGAAGCCCCGCCATCTCCCAATGTTGCACCCGCTGGTTATTACTTGCTCACTGTTGTCAACGGAGGAATTCCCAGCATGTCCCAGTGGGTTCAGTTTACGAGTGCGAGCCCTAATTA 1679 0.4765 MISALLFLVFVRFSDVDGSGSGGGRQGQWQLLLNNTGVVGMHMTLTHHNTVIMFDQTGAGESSYRLRKRFNGSSCSRRTNDLRDSTCYAHSVEYDVGGNRVRPLRLDTDPWCSSGSFLSNGTLLQTGGYGSGATRVRLFRPCDDHQCDWKQSRKSLSDPRWYASSQRVAEHDRVVVVGGRGVFTYEFVPKRDSGEKSFLLPFLHQTNDGSKDGNNLYPFLHLSSDGNLFIFANRDSILLNLRRNRVIKRFPRIPGDGSRNYPSSASCVLLPLHHTDNFTKVEIMICGGAATGASGAANRGRFLTGLRSCGRMVITEDKPKWAMEDMPAPRLLHDMLILPTAQILIINGAKSGCAGYDNARNASLQPYLYSPNKPLGKRFRVLKSTKIPRMYHSAAIVVPDGRVLVAGSNPHGRYTFHKVTYPTELRLEAFVPHYMNRRYHSWRPTNLSIEYGSGGVTAAHGIGYGTEFIVGFLVRKKNIEVEFSAYAPPFTTHSFSMNQRMLKLRSKNMETSKDGWVKAIVEAPPSPNVAPAGYYLLTVVNGGIPSMSQWVQFTSASPN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01435 559 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 17 554 - -
Bva06g01435 559 Pfam Glyoxal oxidase N-terminus 41 288 IPR009880 -
Bva06g01435 559 Pfam Galactose oxidase-like, Early set domain 461 552 IPR015202 -
Bva06g01435 559 Gene3D - 23 440 IPR037293 -
Bva06g01435 559 Gene3D Immunoglobulins 455 557 IPR013783 -
Bva06g01435 559 PANTHER SECRETED PROTEIN-RELATED 17 554 - -
Bva06g01435 559 CDD E_set_GO_C 462 552 IPR015202 -
Bva06g01435 559 SUPERFAMILY E set domains 461 553 IPR014756 -
Bva06g01435 559 SUPERFAMILY Galactose oxidase, central domain 92 434 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01435 Bva-Chr6 10518150 10520156 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01435 - - gmx:100814200 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01435 06 10518150 10520156 Bva06g01435 06 10518150 10520156 ECH