Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01434 ATGGGTGGATCACATTCGAAACGACGAAGCTCGAGGCATCGTTCAACTATAGGTTCTACTTCATATTCGTGGAATTATCCTCAATCGCAATATGGATATGGGCAACAAAGCCACGACCATGTGTCTCAGTTGTATGGGCCTCCATCTCAAAGCTATGGCGGTGGTCGTGCTTCAGAACCAAAAAAGAGGGTAGAGAGGAAGTATTCAAGGATAGAGGACAATTATAATAGCTTGGAGCAGGTAACTGACGCTCTAGCACGTGCTGGCTTAGAGTCTTCCAATCTAATCGTTGGTGTTGATTTCACCAAGAGCAATGAGTGGACAGGTGCACGGTCTTTCCAAAGGAGGAGCCTCCATCACATTGGCCATGAACAGAACCCTTATGAACAAGCAATATCAATTATTGGAAAAACATTGTCATCTTTTGATGAGGATAACAAAATTCCGTGTTTTGGCTTCGGAGATGCGTCAACACACGACCAAgaagtttttagtttttatccGGATGAAAGATTTTGTGATGGATTTGAAGAAGTGTTGAGTCGATATAGAGAATTGGTTCCTCAGTTAAAGCTTGCAGGACCAACATCATTTGCGCCAATCATTGAAATGGCAATCACTATAGTTGAGCAAAGTGGTGGCCAATACCATGTGTTATTAATCATAGCAGATGGACAGGTGACAAGAAGTGTTGACACCGAACGTGGTCAGTTAAGCATACAAGAAAGGCAAACTGTTGAAGCTATTGAAAAAGCAAGCGAATATCCCCTATCAATCATATTAGTTGGAGTTGGTGATGGGCCATGGGACATGATGAGAGAATTTGATGATAACATCCCATCCCGGACCTTTGATAATTTCCAGTTTGTGAATTTTACAGAAATAATGTCAAAGAATATGGATCGTTCCAGAAAAGAAGCAGAATTTGCACTTTCTGCTCTAATGGAAATACCCTCCCAGTACAAGGCAACGCTAGAATTGAATATATTGGGTGCTCGTAGAGGGAAGGGTATAGACAGGATTCCTCTTCCACCGCCTCTTTATGGTGCAGCTTCTTTCAACACCTCAAAAGTTTCCCGTTCAAGCAGTTTTCGTCCAAATGTGCCCTCTAGTGAACGTGAAGTTGGCAGTGCTCCTCCTGCAAGTTCTGCATCTGATAATCATCTTTGTCCCATTTGCATCACCAATCCTAAAGATATGGCCTTTGGTTGTGGACACCAGACATGCTGTGACTGTGGACAAGACCTTCCGTTATGCCCCATTTGCAGGAGTACCATTGATACAAGAATTAAACTTTATTA 1301 0.4212 MGGSHSKRRSSRHRSTIGSTSYSWNYPQSQYGYGQQSHDHVSQLYGPPSQSYGGGRASEPKKRVERKYSRIEDNYNSLEQVTDALARAGLESSNLIVGVDFTKSNEWTGARSFQRRSLHHIGHEQNPYEQAISIIGKTLSSFDEDNKIPCFGFGDASTHDQEVFSFYPDERFCDGFEEVLSRYRELVPQLKLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSIQERQTVEAIEKASEYPLSIILVGVGDGPWDMMREFDDNIPSRTFDNFQFVNFTEIMSKNMDRSRKEAEFALSALMEIPSQYKATLELNILGARRGKGIDRIPLPPPLYGAASFNTSKVSRSSSFRPNVPSSEREVGSAPPASSASDNHLCPICITNPKDMAFGCGHQTCCDCGQDLPLCPICRSTIDTRIKLY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01434 433 Coils Coil 61 81 - -
Bva06g01434 433 PANTHER COPINE FAMILY PROTEIN 1 1 433 - -
Bva06g01434 433 Gene3D von Willebrand factor, type A domain 91 302 IPR036465 -
Bva06g01434 433 ProSiteProfiles Zinc finger RING-type profile. 390 423 IPR001841 -
Bva06g01434 433 CDD RING-HC_RGLG_plant 389 433 IPR045317 GO:0061630|GO:0070534
Bva06g01434 433 Pfam Zinc finger, C3HC4 type (RING finger) 387 428 - -
Bva06g01434 433 SUPERFAMILY vWA-like 94 277 IPR036465 -
Bva06g01434 433 MobiDBLite consensus disorder prediction 1 65 - -
Bva06g01434 433 Pfam Copine 117 330 IPR010734 -
Bva06g01434 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 371 433 IPR013083 -
Bva06g01434 433 PANTHER RING-FINGER PROTEIN 1 433 - -
Bva06g01434 433 MobiDBLite consensus disorder prediction 15 49 - -
Bva06g01434 433 SUPERFAMILY RING/U-box 383 428 - -
Bva06g01434 433 MobiDBLite consensus disorder prediction 359 385 - -
Bva06g01434 433 SMART VWA_4 92 295 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01434 Bva-Chr6 10513917 10517618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01434 K16280 - cit:102630950 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01434 06 10513917 10517618 Bva06g01434 06 10513917 10517618 ECH