Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01419 ATGGAGTCTACTCTAGTGATCAAGGTCAAATATGGAGATATGCTTAGGCGCTTTAATGCTCGTGTAGATGAGAACAACCAACTGTATCTTGACATGGTTGGCTTGAGGGCCAAgatactttctctttttaatctACCTCCTGATGCAAATTTCATGCTGAGATATGTTGATGAAGATGGTGATTTGGTGACACTGGTGGATGACGATGATCTGCATGATGTGATGAGGCAGCAGTTAAAATTCTTGCGGATTGATGTTCACATGATGAGTAGGGACAATGGCAGTAAGTCAACTGCTAGGTCTAGTGGAAGTTCCACCCCCTTGAGATCTCCTCGTGTCCCAGATCCATTTCTGAATGGCAATGCTGCAGTTGCTGATGTTCTGAAGTCTGTTCCTGAGCCAATTCGTGAGGCTTTGTCTAATTTATCGCTTGATTTGGCTTCAAAAACTGCGTCATCAAGTCCAGTGCTCGCTACTCTTGCGGATTGTTTTTCTAAAATGGGACAATCCTTGCTAAATTCTGATTCTCAGCCTCAGGTTGCAGTTGGTTCAAGCTCAAAAGATGGTGTTCCTATGACTGCTGTTTCTTTTGCAGAAGGCGGTTCACAGTCTGTAACCCTAGACCAAACTTCTAATATCAGGCAGCAGGTGGAGGCTCGAAATGTAACTAGAGACATGGTGGCACCTGTTGCCCCTGTTGATCTCAACGTTCCTCCATGTGATCTCAATCCATATCAATCCACAATAGTGAATACTACAGCAATTCCATCAGCAGTCTCTGATGGTGATGTCAGAAAGGGAAAGATTGTAACTGATGATGGTTCTAGCAGGAAAGGTGATAGTTCTGGGGCACCTACTAGTCATGCAGCTCCTGGTAACAGCTCAACCCAGAATATTGGAAGGGGTTCTAGTCCTTATGTTGAATGCCCATTTTCTGGAACGCATTTTATTGATTCAGCTCCACCTTCTCTTGGGAATCATCGTGTTCATCCATTTAAAAGGAGTCATAGTCACACCGAGGCTGCATGTGGTATGTTCCATAAGGGTGTCAGATGTGATGGATGTGGTGTTTATCCAATAACTGGACCTCGTTTCAAATCCAAAGTgaaagaaaattatgaccTCTGCAGCATCTGCTTCAATGAAATGGGTAATGAGTCTGATTATATCAGAATGGACCACCCTGTGTCTGTTCGTGCTCCACGATCCTTCAAGGGTTTATATGAACACCCAGCTTGGGTGGGACCTCCGACCTTACCACATATCTTTAGAACGGGTGGTATGAAGCACATGCGACCCAAGCTTGATAGCCGGTTCATTTTGGATGTCAATGTGATAGATGGTACAATGATGGCTCCATCTACTGGCTTTACAAAGATTTGGCGGATGCGAAACAATGGCACTATAGTGTGGCCCAAGGGAACTCAACTTGTTTGGATTGGAGGAGACAAATTTAGTGACTTTAGATCGGTTGACTTGGAGATTCCTGTGGATGGTGTACATGTGGACAAGGAACTTGACATTGCTGTTGACTTTAGAGCACCTCAATCTCCTGGTCGATATATTTCATACTGGAGGATGGCATCCCCTTCTGGTCAAAAATTTGGTCAACGTGTTTGGGTTCTTATACAGGTTGATGCTTCTCTCAAGGAGTTTTTTTATGATAGGTCTCAGGGTCTGAACTTGAACATTCCCCTTGTTGGCAGTAGCTTGAGCGGGCCTGAGATTGTAGATATCAATGTGCAACCTATTTTGGATGATGTTTTTCTTCAACCCCATAATCCTAATGTTCCCACTGAGCCTGTGAAACAAATGGTTGATGAGCAACCAGGGAAAGAGCCGGAAAATGACTTGAATATAAATGACACCACACTAGTTGGCCATGGTGCCTTGCCTCCTGTAACTTCTGCGGCACCTACATCCGTTTCTTATCCCATTATTGATTTCTCTGAAATAGCCCCAGCTGTTCCCTTCAACCCGGAGTCCTCAGTTGTTGATGCTCCGTCATCATCTCTCGGGGTTGATGGGAATAATCCTGTTGAGGAGTCTCTCCTTAAAGAACTTGAAGAGATGGGTTTTAAGCAGGTTGATTTGAACAAAGAGATCTTGAGGATGAATGAGTATAATCTGGAGCAGTCAGTGGATGATCTTTGTGGTGTTTCTGAATGGGACCCTATGCTTGAGGAGTTACGAGAGATGGGTTTCTGTGACAACGAAGTGAACAAGAAACTGCTGATGAAAAACAACGGAAGCATTAAACGTGTTGTTATGGATCTGATCAATGGAGAGAAGAATTG 2297 0.4349 MESTLVIKVKYGDMLRRFNARVDENNQLYLDMVGLRAKILSLFNLPPDANFMLRYVDEDGDLVTLVDDDDLHDVMRQQLKFLRIDVHMMSRDNGSKSTARSSGSSTPLRSPRVPDPFLNGNAAVADVLKSVPEPIREALSNLSLDLASKTASSSPVLATLADCFSKMGQSLLNSDSQPQVAVGSSSKDGVPMTAVSFAEGGSQSVTLDQTSNIRQQVEARNVTRDMVAPVAPVDLNVPPCDLNPYQSTIVNTTAIPSAVSDGDVRKGKIVTDDGSSRKGDSSGAPTSHAAPGNSSTQNIGRGSSPYVECPFSGTHFIDSAPPSLGNHRVHPFKRSHSHTEAACGMFHKGVRCDGCGVYPITGPRFKSKVKENYDLCSICFNEMGNESDYIRMDHPVSVRAPRSFKGLYEHPAWVGPPTLPHIFRTGGMKHMRPKLDSRFILDVNVIDGTMMAPSTGFTKIWRMRNNGTIVWPKGTQLVWIGGDKFSDFRSVDLEIPVDGVHVDKELDIAVDFRAPQSPGRYISYWRMASPSGQKFGQRVWVLIQVDASLKEFFYDRSQGLNLNIPLVGSSLSGPEIVDINVQPILDDVFLQPHNPNVPTEPVKQMVDEQPGKEPENDLNINDTTLVGHGALPPVTSAAPTSVSYPIIDFSEIAPAVPFNPESSVVDAPSSSLGVDGNNPVEESLLKELEEMGFKQVDLNKEILRMNEYNLEQSVDDLCGVSEWDPMLEELREMGFCDNEVNKKLLMKNNGSIKRVVMDLINGEKN 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01419 765 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 679 717 IPR015940 -
Bva06g01419 765 SMART PB1_new 4 89 IPR000270 GO:0005515
Bva06g01419 765 Gene3D - 673 721 - -
Bva06g01419 765 Pfam Ig-like domain from next to BRCA1 gene 444 545 IPR032350 -
Bva06g01419 765 ProSiteProfiles PB1 domain profile. 4 86 IPR000270 GO:0005515
Bva06g01419 765 Gene3D - 1 88 - -
Bva06g01419 765 SUPERFAMILY CAD & PB1 domains 4 80 - -
Bva06g01419 765 CDD NBR1_like 433 546 IPR032350 -
Bva06g01419 765 Gene3D Immunoglobulins 429 550 IPR013783 -
Bva06g01419 765 MobiDBLite consensus disorder prediction 264 304 - -
Bva06g01419 765 Gene3D - 340 398 IPR043145 -
Bva06g01419 765 PANTHER PROTEIN JOKA2 1 213 - -
Bva06g01419 765 SUPERFAMILY RING/U-box 340 398 - -
Bva06g01419 765 MobiDBLite consensus disorder prediction 276 303 - -
Bva06g01419 765 MobiDBLite consensus disorder prediction 92 109 - -
Bva06g01419 765 SUPERFAMILY UBA-like 723 761 IPR009060 GO:0005515
Bva06g01419 765 SMART zz_5 346 391 IPR000433 GO:0008270
Bva06g01419 765 PANTHER PROTEIN JOKA2 283 763 - -
Bva06g01419 765 Gene3D - 722 765 - -
Bva06g01419 765 ProSiteProfiles Zinc finger ZZ-type profile. 347 397 IPR000433 GO:0008270
Bva06g01419 765 CDD UBA_NBR1 722 760 - -
Bva06g01419 765 Pfam PB1 domain 5 84 IPR000270 GO:0005515
Bva06g01419 765 MobiDBLite consensus disorder prediction 92 115 - -
Bva06g01419 765 Pfam Zinc finger, ZZ type 347 382 IPR000433 GO:0008270
Bva06g01419 765 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 283 763 - -
Bva06g01419 765 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01419 Bva-Chr6 10453057 10456861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01419 K17987 - qsu:112012186 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01419 06 10453057 10456861 Bva06g01419 06 10453057 10456861 ECH