Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01417 ATGTCTATGAGGCTGTATGTGTATCTCTTGGAAGCCAAGGACTTGGCTACAAAGTATAAAGATTTCTATGTCAAACTTAAACTTGGCAAATTGAAGTCCAAGACTCGGACATTGAGGAACACGCCCAACCCTGTCTGGAATGAAGAATTTGTTTTCAGGGTGCATGACACAGATGACGAGCTTATTGTTTCTGTTATTAGTCGCAATGATGTATCCAAAGTCCCCATTGGTTCCGTGGATATATTGGGTCAGGTGCGGATTCCGGTAGCATCAATTTCCGCCGAGGATAATCAAACCTTGCCGCCTACATGGTTCTCTCTTGAAAGTTCCAAGGGTAAAAAAGTTGTCAACAGAGACTGTGGGAAGATTCTCCTCAGCATTTCTCTTCATGGTAAAATCCACACTGCTACCCTCAATCATACGATTTGTACGAATTCACATGTTACAATGGAGGACCCTAAAGAATTGGAAGGTCCATTCATTTCATCTGAGAACATTTATAGCTGCAAAGCTCCCTCCGGTAtgttaaacaagaaaaaaaagttcttgAAGGTTATTACTAATCCTTTGGAGAGGGTTttgaataagaaagaagatagCTCAAAATCTTATGACCATTCAGAACCATCCGGTTTATCATCCGATAGGGAAGCTTGCAAGCAGGAATATCCCTCTCCTTGTAGCTTCGAAGAAGCTATTGCATTAATGGAATCAAGAGATGATAAACAAGACATGCCTGAAAACCTGCAGGGTGGCATTCTAGTGGATCAGATTTATTCAGTGTCTCCATATGATCTTAATGCAGTTCTTTTTGCACCCAATTCCCAGTTCAGGAGAGATTTGGCAGAACTTCAGGGCACAACGTGTTTACAAGAGGGGCCTTGGACATGGAAATCTGGAGATATGTCTTGTTTAACACGGGTTGTTTCTTATACAAAAGCTGCTACCAAGTTAGTTAAGGCTGTTAAAGCCACTGAGGAGCAAACttatattacaataaataaaaaggaatttgCTATACTTGTCAATGTGAGCACGCCTGAGGTTCCATATGGAAATACCTTCAGAATTGAATTGCTTTATAAGATAGTGCTAGGAAGAGAGCTGTCTTCGGGGGAAGAAACCTCCCATCTAGTGGTGTCCTGGGACATTGCCTTCCTGCAAAGCACAATGATGAGAGGTATGATAGAGGGTGGGGCTCGGCAGGGATTGAAGGAGAGTTTTGATCAGTTCTCTAACCTACTTGCTCAGAATTTTAAGGTGCTAGACTCCTCAGATTTATTAGACAAAGAACAAATGCTGGCAACTTTGCAAAGAGAACAGCAGTCAACTTGGTGGATGGCGATTGAGTACTTTTGGAATTTCACAGTAGTTTCTACCATTTGTATGTTATTGTATGTGTTGGtgcatattttttgttgtggTCCAAATGAACCGCGAGGCTTGGAATTTTGGGGTCTTGAACTGCCAGACAGCTTTGGAGAGCTCATTACATGCGGAATTTTAATCATCCAATTACAGCGTGTTTGTAATATGGTCTTTCACTTCGTACAAGCTAGATTTCAAATGGGAAGCGATCATGGAGTGAAAGCCAACGGTGATGGATGGGTTCTTACTGTTGCTTTGATTGAGGGAGTTGACTTGCCATGCTTGGAATCAACAGGACTGTCAGATCCTTATGTGGTTTTCACCTGCAATGGTAAAACGAGATCAAGCTCTGTCAAACTCCAAACCCGTGATCCTCAATGGAACGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTGGATGTGGaggtttttgattttgatggtCCATTTGACCAGGATGTTTCACTTGGACACGCCGAGATCAATTTCCTAAAGCACTCATCTACTGAATTGGCTGACATGTGGGTCTCCCTTGAAGGAAAGCTTGCTCAGTCCTCTCAATCAAAGTTGCGTTTGAGAATTTTTCTGGACAATAATAAAGGAGTTGAAACAATTAGGGAATATTTGACAAAGATGGAAAAAGAAGTTGGAAAAAAGTTGAATCCCAGATCACCACGGAGGAATTCTACATTCCAGAAATTGTTCCGATTGCCGCCAGAAGAATTTCTCATCAGTGATTTCACATGCTATCTGAGGAGAAAAATGCCTTTACAGGGTCGGCTGTTTTTTTCTGCTAGGATTCTGGGGTTTTATGCCAATTTTTTTGGacataaaactaaatttttcttcctttgggAGGATATTGAAGACATCAAAGTGCTCCCTCCATCACTTGCATCACTAGGAAGCCCTACTCTGGTCATAATTCTGCGAAGAGGTCGAGGTCTTGATGCTAGGCATGGAGCAAAGACTCAAGATGAAGAAGGCAGGCTtagatttcattttcagtCTTTTGTGTCATTCGGTGTTGCTTCCAGGACAATAATGGCCTTATGGAGGACAAGACTGTTAACCCCTGAGCAAAAAGCACAAATTGCAGAAGACCAGGAAGATCAAGAAGACTTTTTAATTCCCAACGACTCTGGATCTATCTTGGACGATGAACCAAAAATGTCTATAATTTACTCTACAGAACTTCCGATCAAGATGAGATCAGTGATGGAAATATTTGATGGGGGAAACTTTGAGCGAAGGATTATGGAGAAATCCGGATGTAGTAATTATGCATCTACTAATTGGGAGTCTGTGAAGTCTGGTGTCTTTGAGCGACATGTTTCTTACAGATTCAACCGCCACGTGTCAGTTTTTGGAGGAGAGGTTACATGCACTCagaaaaaatttccaattggCAACATTGAAGGCTGGATTGTGAATGAAGTCATGACCCTTCATGGTGTACCATTTGCCGATCACTTCCGTATTCATTTTAGATACCAAATTGAGAAGTCTGCTCTTGGTGATTGTGCCTGCAAGTTTGATGTTTATATTGGGATTATGTGGCTTAAAAGCTCCAAATTTCAGCAAAGGATCAACAGGAATATCACACACAAGTTTACCAATCGATTCAAGGAAATATTTGATCTGCTTCAGAGGGAGATTTTGCTAGTCTCGGGATG 3056 0.3976 MSMRLYVYLLEAKDLATKYKDFYVKLKLGKLKSKTRTLRNTPNPVWNEEFVFRVHDTDDELIVSVISRNDVSKVPIGSVDILGQVRIPVASISAEDNQTLPPTWFSLESSKGKKVVNRDCGKILLSISLHGKIHTATLNHTICTNSHVTMEDPKELEGPFISSENIYSCKAPSGMLNKKKKFLKVITNPLERVLNKKEDSSKSYDHSEPSGLSSDREACKQEYPSPCSFEEAIALMESRDDKQDMPENLQGGILVDQIYSVSPYDLNAVLFAPNSQFRRDLAELQGTTCLQEGPWTWKSGDMSCLTRVVSYTKAATKLVKAVKATEEQTYITINKKEFAILVNVSTPEVPYGNTFRIELLYKIVLGRELSSGEETSHLVVSWDIAFLQSTMMRGMIEGGARQGLKESFDQFSNLLAQNFKVLDSSDLLDKEQMLATLQREQQSTWWMAIEYFWNFTVVSTICMLLYVLVHIFCCGPNEPRGLEFWGLELPDSFGELITCGILIIQLQRVCNMVFHFVQARFQMGSDHGVKANGDGWVLTVALIEGVDLPCLESTGLSDPYVVFTCNGKTRSSSVKLQTRDPQWNEILEFDAMEEPPSVLDVEVFDFDGPFDQDVSLGHAEINFLKHSSTELADMWVSLEGKLAQSSQSKLRLRIFLDNNKGVETIREYLTKMEKEVGKKLNPRSPRRNSTFQKLFRLPPEEFLISDFTCYLRRKMPLQGRLFFSARILGFYANFFGHKTKFFFLWEDIEDIKVLPPSLASLGSPTLVIILRRGRGLDARHGAKTQDEEGRLRFHFQSFVSFGVASRTIMALWRTRLLTPEQKAQIAEDQEDQEDFLIPNDSGSILDDEPKMSIIYSTELPIKMRSVMEIFDGGNFERRIMEKSGCSNYASTNWESVKSGVFERHVSYRFNRHVSVFGGEVTCTQKKFPIGNIEGWIVNEVMTLHGVPFADHFRIHFRYQIEKSALGDCACKFDVYIGIMWLKSSKFQQRINRNITHKFTNRFKEIFDLLQREILLVSG 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01417 1018 Pfam VAD1 Analog of StAR-related lipid transfer domain 854 994 IPR031968 -
Bva06g01417 1018 Pfam VAD1 Analog of StAR-related lipid transfer domain 254 403 IPR031968 -
Bva06g01417 1018 Gene3D C2 domain 521 656 IPR035892 -
Bva06g01417 1018 ProSiteProfiles C2 domain profile. 517 636 IPR000008 -
Bva06g01417 1018 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 135 IPR035892 -
Bva06g01417 1018 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Bva06g01417 1018 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 536 659 IPR035892 -
Bva06g01417 1018 Gene3D - 687 814 IPR011993 -
Bva06g01417 1018 MobiDBLite consensus disorder prediction 197 215 - -
Bva06g01417 1018 PANTHER BNAA05G37250D PROTEIN 3 1016 IPR044511 -
Bva06g01417 1018 Gene3D C2 domain 1 132 IPR035892 -
Bva06g01417 1018 SMART C2_3c 537 635 IPR000008 -
Bva06g01417 1018 SMART C2_3c 4 101 IPR000008 -
Bva06g01417 1018 ProSiteProfiles VASt domain profile. 850 1017 IPR031968 -
Bva06g01417 1018 SMART gram2001c 689 755 IPR004182 -
Bva06g01417 1018 ProSiteProfiles VASt domain profile. 250 423 IPR031968 -
Bva06g01417 1018 MobiDBLite consensus disorder prediction 197 219 - -
Bva06g01417 1018 Pfam GRAM domain 690 763 IPR004182 -
Bva06g01417 1018 CDD C2 538 638 - -
Bva06g01417 1018 Pfam C2 domain 4 106 IPR000008 -
Bva06g01417 1018 Pfam C2 domain 537 638 IPR000008 -
Bva06g01417 1018 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 3 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01417 Bva-Chr6 10441233 10446122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01417 5 135 Lipid Metabolism Gene Families AT3G61300 31.159 2.83e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01417 - - gmx:100811103 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01417 06 10441233 10446122 Bva06g01417 06 10441233 10446122 ECH