Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01408 ATGGCTAACGCTGAGGAGGAAAAGAGCCTCCAAGAATTACTCTCGCTTCCGATCCTACTAGGAGACCGTGTTACCCAAGAAGCAGAGTCGTCCAAGGTAGATTGTTCTGAAGTGGCCAAGCAAGTGGAACGCCTCTGTACCATGCTTCGATCCACTGTGCGACTCGCCTCCACCACTCAGTCTCTGTACGAGCGACCCATTCGACGAATCGTCGCCGATATCTCCAAGAACATTGAACGAGCCCTAACCCTGGTCCGCAAGTGCAAGAAACACAGTGGTGTTCTTCGTCAAGTCTTCTCCATCACCACCACCGCTGACTTTCGCAAGGTATCCACCTCTCTTGAGTCTTCTATTGGAGACATGAGGTGGCTACTTAGTATCTTCGATTCTGTCGATGGTACTAACCTCTCTCTCCCTCCAATCGCTAGCAACGACCCTATTCTCGCTTGGGTATGGTCCTATACCGCCACCATTCAGATGGGCGAGCTGAAGGAACGAGCCGATGCTGCCAACGAGCTTGCTTCCGTCGCCAAAGACAACGATCGTAACAAGTTGATTATCATGGAAGAAGGTGGCATTTTGCCGTTGCTCAAGTTACTAAAGGAGGCAACTTTACCCGACGCTCAAATTGCAGCAGCCAATGCTTTAGTCAATATTGCTACTGACCAAGAGAGAGTAGTGAGGTTCATCGTAGAATCACTTGGGATTCCGCTTATTGTGAAGGTTCTTGGCGAAGCACCAATGAGGGTTCAGGTTTCTGTAGCAAATTTGGTTTCAAGAATGGCGGAGCAAGACCAAGTTGCTCAGGACGAGTTTGTGAGGGCGAATGTGACTAGACCCCTTGTATCGTTGTTGTCGATGGATATAGTTCTGGGTGAACCTATGCGTCAGGCGGGTAGAACAAGTATACATTCGCTGGTTATGAACTTGTCTTCGACTGGTAATCCATCCGTTAATTCAAATTCTGATGGCAGTAGTCGAGGAGGGCAtcagagaaaggaaagggaggcTGAGAGTCCGGATTTAAAGCACAAGACCAAAATAAGCTGTTCTGAGGCACTGTGGAAACTCTCGGTCGGGAGTATATCAACTAGTCGGAAAATTACAGAGACCAAAGGTTTACTTTGTTTGGCAAAAATGATTGAGACGGAGACAGAAGAATTGCAGTTTAATTGCCTTATGGCAGTCATGGAGATCGCTGCAGTAGCAGAAGCTAATGCTGATCTTAGAAGGGTAGCTTTTAAGCCTAGTGCTCCAGCAGCAAAAGCCGTCTTGGATCAGCTTTTGCGAGTGATTCAGGAAGAGAGCGGTCCGTCCTTGCAAATTCCAGCCATTAAATCTATTGGGTCATTGGCCCGAAACTTCCCGGCAAAAGTTCCACGGATTATTGGTCCTTTAGTTGCCCAACTTGGTAATAAGAATGTTGATGTGGCAATTGAAGCAGCTATTGCCTTGGGTAAATTTGTGTGCTCGGATAACTACAATCGCGTTGATCATTCCAAGGCAATAATCGAGTTTGATGGGATTCCCAGTCTAACGAGACTTGTGCGGGCTAATGATCGTGCTCAAATGCATGGTTTGGTTTTACTGTGTTACCTTGCATTGCACGTGGGCAATAGTAAAGCTCTTGAGCAAGCACGAGCATTGAATATTCTTGAGGGGGCAGCTCGTTCTGTTGTAGCTCAATATCCTGATTTGAGGGAACTGTTTTCCCGAGCCATACACCACCTCACTCTTTATCAGACAGGAGTTCAGTTGCACAGACAGCCTTATGTGCCATA 1781 0.4672 MANAEEEKSLQELLSLPILLGDRVTQEAESSKVDCSEVAKQVERLCTMLRSTVRLASTTQSLYERPIRRIVADISKNIERALTLVRKCKKHSGVLRQVFSITTTADFRKVSTSLESSIGDMRWLLSIFDSVDGTNLSLPPIASNDPILAWVWSYTATIQMGELKERADAANELASVAKDNDRNKLIIMEEGGILPLLKLLKEATLPDAQIAAANALVNIATDQERVVRFIVESLGIPLIVKVLGEAPMRVQVSVANLVSRMAEQDQVAQDEFVRANVTRPLVSLLSMDIVLGEPMRQAGRTSIHSLVMNLSSTGNPSVNSNSDGSSRGGHQRKEREAESPDLKHKTKISCSEALWKLSVGSISTSRKITETKGLLCLAKMIETETEELQFNCLMAVMEIAAVAEANADLRRVAFKPSAPAAKAVLDQLLRVIQEESGPSLQIPAIKSIGSLARNFPAKVPRIIGPLVAQLGNKNVDVAIEAAIALGKFVCSDNYNRVDHSKAIIEFDGIPSLTRLVRANDRAQMHGLVLLCYLALHVGNSKALEQARALNILEGAARSVVAQYPDLRELFSRAIHHLTLYQTGVQLHRQPYVP 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01408 593 MobiDBLite consensus disorder prediction 312 326 - -
Bva06g01408 593 MobiDBLite consensus disorder prediction 327 344 - -
Bva06g01408 593 Gene3D - 338 578 IPR011989 -
Bva06g01408 593 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 191 224 IPR000225 GO:0005515
Bva06g01408 593 SMART arm_5 179 221 IPR000225 GO:0005515
Bva06g01408 593 SMART arm_5 222 263 IPR000225 GO:0005515
Bva06g01408 593 SMART arm_5 496 535 IPR000225 GO:0005515
Bva06g01408 593 Coils Coil 160 180 - -
Bva06g01408 593 Gene3D - 155 319 IPR011989 -
Bva06g01408 593 PANTHER ARMADILLO REPEAT ONLY 4 5 592 - -
Bva06g01408 593 Gene3D - 23 127 IPR036537 GO:0007166
Bva06g01408 593 SUPERFAMILY ARM repeat 164 577 IPR016024 -
Bva06g01408 593 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 5 592 - -
Bva06g01408 593 MobiDBLite consensus disorder prediction 312 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01408 Bva-Chr6 10400804 10403126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01408 - - gmx:100813824 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01408 06 10400804 10403126 Bva06g01408 06 10400804 10403126 ECH