Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01400 ATGGCTAAGATTCCCACTGTGTTCTCCCTGAGACACTGTTTTGTAGTGTCGCTTGCTTTAAATTTCAGTCTGATTCTGAGAATGATGTATGAAAGAGAACAGGGCTGTAAAGGGGCCTTTTGGAAGAAGCAGAGCGAGTCGTCAATGGCGGAAGTGGATTCCAATCACTTGATGCACAAGTCCCATTTGGCTGTTTCCTCCTCTTCGCCTTTGGTTAATTCAACTCGCACAGATCACCCAAAAGTCGCAGAAAGAGTAATCAATCTTGACCACGGAGATCCGATCATGTATGAACACTTTTGGCGACAAATGGGTGACAAGACCACTATTATAATTCCTGGGTGGCAGTCCATGAGCTATTTTTCTGACTTGAGCAGCATTTGCTGGTTTCTTGAGCCTGAGTTTGCTAAAGAGGTGGTGAGGTTGCACAATGTGGTCGGAAATGCTGTCACTGAAGGTCGTCACGTTGTTGTTGGGACAGGTTCCTCTCAGCTCTTCTTGGCTGCTCTTTATGCTCTGTCACCGCCTGATGCTGCTGAACCAATCAGCGTGCTATCTGCTGCCCCATATTACTCGTCGTACCCAGTAATGACTGATTACCAGAAATCAGGGCTGTACAAATGGGCTGGTGAAGCGGAGAGTTTTGATAAAGAGGGACCTTATATTGAGCTAGTTACTTCCCCCAACAACCCTGATGGATATGTCAGGCACTCTGTGGTCAATCGAACCCGGGGATTCTTGGTCCATGACCTTGCCTATTATTGGCCACAGTACACTCCAATTTCATCACCTGCAAATAATGATCTAACGCTATTCACTGTCTCAAAAAGCACTGGTCATGCAGGAATGCGCATTGGGTGGGCTCTTGTCAAAGACAAAGAGGTAGCAAGGAAAATGACTAAATTCATAGAGCTGAACACCATAGGTGTCTCAAAGGATTCCCAGCTCAGGGCAGCAAAGGTTTTAAAGGCAGTGTCCGACAGCTGTGAGGAAGAAGGAAGCTCTCAAGAGGCTGAGTCTTTCTTCAAATACAGTTACAATATTATGGAGCATAGGTGGAAGCAACTGAGAGTAGCAGTTCAACGTAGTGGAATGTTCAGTTTGCCCACCTTCTCTCCTGCATTCTGCACTTTTTTCAGTCAGGTGTTGGAGCCTCATCCTGCTTTTGTGTGGTTGAAATGTGAAGGAGACATTGAGGATTGTGAAAGATTCCTTCGAGGACACAAGATCTTGACAAGGAGTGGGGTACAATTTGGGGTTGACCCAAAATATGTTAGGGTTAGCATGTTGGATACAGATGAAAATTTCATCCACTTTATAGATAGGCTTTCTGCCATACACCCGTG 1346 0.4562 MAKIPTVFSLRHCFVVSLALNFSLILRMMYEREQGCKGAFWKKQSESSMAEVDSNHLMHKSHLAVSSSSPLVNSTRTDHPKVAERVINLDHGDPIMYEHFWRQMGDKTTIIIPGWQSMSYFSDLSSICWFLEPEFAKEVVRLHNVVGNAVTEGRHVVVGTGSSQLFLAALYALSPPDAAEPISVLSAAPYYSSYPVMTDYQKSGLYKWAGEAESFDKEGPYIELVTSPNNPDGYVRHSVVNRTRGFLVHDLAYYWPQYTPISSPANNDLTLFTVSKSTGHAGMRIGWALVKDKEVARKMTKFIELNTIGVSKDSQLRAAKVLKAVSDSCEEEGSSQEAESFFKYSYNIMEHRWKQLRVAVQRSGMFSLPTFSPAFCTFFSQVLEPHPAFVWLKCEGDIEDCERFLRGHKILTRSGVQFGVDPKYVRVSMLDTDENFIHFIDRLSAIHP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01400 448 Gene3D - 75 127 IPR037029 GO:0016846
Bva06g01400 448 Gene3D - 132 335 IPR015421 GO:0003824
Bva06g01400 448 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 447 - -
Bva06g01400 448 CDD AAT_like 133 443 - -
Bva06g01400 448 Pfam Allinase 87 446 IPR006948 GO:0016846
Bva06g01400 448 SUPERFAMILY PLP-dependent transferases 79 445 IPR015424 -
Bva06g01400 448 Gene3D Aspartate Aminotransferase, domain 1 338 447 IPR015422 GO:0003824
Bva06g01400 448 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01400 Bva-Chr6 10356142 10361099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01400 K16903 - gmx:100818522 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01175 11 12732611 12735219 Bva06g01400 06 10356142 10361099 BWGD
Bva06g01400 06 10356142 10361099 Bva06g01400 06 10356142 10361099 ECH