Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01389 ATGGAAGCTCTCAAGTTGGCAGAACAAGACAAAAAGTTCATGTTCGTGTACCTGCACTCACCAGAACACCCTTTAACGCACATGTTCTGCAGCGAGACACTGTGTTCGGAGTTAGTGATGCAGTTTCTTGATGTTAATTTCGTGTGCCGGGGAGCACTTGCAGATAGAGGAGAAGCTTTACAAATGGTAGCAACATTACGCCCTTCTAGCTTCCCCAGTTGCGCTGTCATAGCCCATGCTCCTGGTGATTCCATAACAGTGCTGCAACagATAGAGGGGCCAGTTTCACCAGCTGAGCTGGTGGCGATTCTACATAGAACAATAGAAGAGCAAGGTGTGGCTTTTGGAAGTGCTCAACCTAAgcacaaagaaaatatcagaGCAGACCGTCAGCTAAGAGAAGAACAAGACGCTGAATATCTCGTTGCTTTGCAAATGGACAAGgaaaaaaaaagactcaaGAATTCACCCTCAAAAGAGAGAGTTCACGTACCTGAATCTCCCAACACAAGAAATCATGAGAATCCAAGGAACAATTCTATCAGTAAACAGCCCAATAAAGTGAATGAGTGTACCGCTAGAAAGGAAAACCAATCCAATCCAATTTCGAAGGGATTCCAACAAGAGGTGATATTTATCAGGTTTCCaaatggagaaagaagagagcaTAGCTTTCAGTGCACAGACAAAATCCAGTCTATTTTTACATACATTGATTCATTGGGTCTGCAGGGAATTGGGAACTACAGATTGATATCAATCTTTCCAAGAAGAGTGTATGGTGTGGATCAGATGAGAATGACTCTCAAAGATGCTGGCTTGCATCCTAAAGCTAGCCTCTTCCTTGAGCCATTTTA 857 0.4096 MEALKLAEQDKKFMFVYLHSPEHPLTHMFCSETLCSELVMQFLDVNFVCRGALADRGEALQMVATLRPSSFPSCAVIAHAPGDSITVLQQIEGPVSPAELVAILHRTIEEQGVAFGSAQPKHKENIRADRQLREEQDAEYLVALQMDKEKKRLKNSPSKERVHVPESPNTRNHENPRNNSISKQPNKVNECTARKENQSNPISKGFQQEVIFIRFPNGERREHSFQCTDKIQSIFTYIDSLGLQGIGNYRLISIFPRRVYGVDQMRMTLKDAGLHPKASLFLEPF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01389 285 SUPERFAMILY Thioredoxin-like 2 113 IPR036249 -
Bva06g01389 285 Gene3D - 210 284 - -
Bva06g01389 285 SMART 45neu3 1 105 IPR006577 -
Bva06g01389 285 Pfam UBX domain 211 283 IPR001012 GO:0005515
Bva06g01389 285 CDD UAS 1 110 - -
Bva06g01389 285 MobiDBLite consensus disorder prediction 171 187 - -
Bva06g01389 285 SMART ubx_3 204 284 IPR001012 GO:0005515
Bva06g01389 285 CDD UBX 213 283 - -
Bva06g01389 285 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 1 283 - -
Bva06g01389 285 PANTHER FAS-ASSOCIATED PROTEIN 1 283 - -
Bva06g01389 285 Gene3D Glutaredoxin 1 113 - -
Bva06g01389 285 ProSiteProfiles UBX domain profile. 211 282 IPR001012 GO:0005515
Bva06g01389 285 MobiDBLite consensus disorder prediction 146 187 - -
Bva06g01389 285 SUPERFAMILY Ubiquitin-like 198 284 IPR029071 -
Bva06g01389 285 MobiDBLite consensus disorder prediction 146 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01389 Bva-Chr6 10283510 10285429 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01389 K18726 - gmx:100775212 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01389 06 10283510 10285429 Bva06g01389 06 10283510 10285429 ECH