Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01382 ATGACGGATTCCTCTGCAACTCTCCACTGGAAGTTTTCCCAGGTATTCGGGGAACGAGCTCCCAGCGAGGACCTTCAAGAGGATGATATTATAACAGCAATTGGGTTCGAGAAGCGTGGTGATTACCTTGCTCTTGGAGACCGAGGTGGccgtattataatttttgaaagagatgataaaaagaatGCTTCAAATCAGCAGCATGCTCGAAAAGACTTGGAGCAGACGTATTTCGCTCCCGCTCAGCATCCCCAATTTCGGTATAAGACGGAGTTTCATAGCCATGAACCTGAGTTTGATTACTTGAAGAGTGTAGAAATTGAAGAGAGGATTAACAAGTTAAGGTGGTGTATAACTCATAGAGGATCGCTCTTTATTCTTTCaacaaatgataaaacaattaaactgTGGAAGGTTAAGGAACATAAAGTGAAGCAAGTAAAAGAAATGGTTCCTCTTCCATCAGTATGCTCAGAAAATGCGCTTTTAGCTGAAAGCAGTTTCATGAGTGAGCAAGAAAACCCACACGCTGCTAATGGATATCATTTAGAATGGATCAAACCGTTGGCTCAGAATCTGTCTCAAGATATTGCTTGCAAGATTGCTGGCATGCAAGACACTGTTCGAACAAAATGTCAAAAGGTGTATGCTCATGCTCACAGTTTCAATATTAACTCCATCTCAAATAATAGTGATGGTGAGACATTTATTTCAGCAGATGACCTTAGAATCAATTTGTGGAATCTTGATGTTAATGATCAGGGTTTCAATATTATTGACATGAAACCGTCAAACATGGAGGATCTTACTGagGTCATAACATCGGCTGAATTCCATCCATTACACTGTAATCTGCTAGCATATAGCAGTTCACGAGGTTTTATTCGGCTATCTGACTTGCGACAAGCAGCAAGATGTGATGATCATGGTACTAGAATATTTCGACACGGAGATTCCCATGGattgaaatcattttttacGGAGATCATTACATCCATCTCAGATATAAAGTTTTTGAATGACGGGCAGCATATTATAAGTCGTGATTACATGACTATGAAGCTTTGGGATATGCGTATGGATTCTTCTCCGGTGGCAATATTCAAGATTCATGAGCACCTGCGCCCTAAGCTAGCGGAGTTATACAATAATGACCGCATATTTGACAAATTTGAGTGCTGCTTTAGTGGAGATGGACTTCATTTTGCAACTGGTTCTTATGGCAATCTGCTTCGGACATTCTCCCCTGGTACTGGAACTGAGGAAACTTTCAGATTAGAAGTTAGCAGAAATTCTGACAGGAAGCATCTTCATCAAGCTGCTCCAAAGGTTAGAAGGTCATCTTTAAGCAACCTGACACGTGGATTTTACCGCCATGACAACTCAAGCTCTAATGACTTCTCATGTAACTTGGACTCCAAGCTGCTGCATGTAGCATGGCATCCGACATCCAATTTAGTTGCCTGTGCTGCTGAAAGCACAGCGTCCGACAAGGGCTTGGATATAGCATTTTGCATACGAGATTGCCCTCTCTTCCTTTCATCTTCAGGGATCATGATAGGAACTGCAGAAATTGATGTTGTTGATTTATCTAGTGACGACGAAGTTATTCCTAAAGAGGTTAAATTGGAGTCTGATGTTGTTGGTACTTCCGAGCTACAAAATGAGACCGACAAATTCCGTGTAGCCAATCAATATtctgaagaaaatagaagttCTAATGTTCAGAGTACGGGTTCTAGTGTGTTGGAGCAAGGGATGTCCCCAGTTGATGATACGGGTCTTTCCTCTGCATCACCAATTGGTGCAGCACCCATTTGTAGGCAGTTTTGGAAAGCTGGACAATATGATGATGGGATTGGATCTACCGTCGCAGTTCAAAATGCAAAAAACTATCTGCACGTCCACCCTTTGTTCCTTCACTCAAATGCAACTTCACATAAGTGGGCATTTGGTGCCATAGCAGAGCTTCTAGATAATGCAATTGATGAGGCCCATAATGGCAAAGGGGCTACTTTTGTCATTGtagataaaactttaaatccAAAGGATGGAAGTCCTGCATTGTTGATTCAAGATGATGGTGGTGGAATGGATCCAGAAACCATGCGTCGTTGTATGAGTTTTGGATTTTCCGATAAGAAGTCAAAATCTGCAATTGGACAGTATGGAAATGGCTTCAAGACTAGCACTATGAGACTTGGTGCAGATGTCATTGTGTTCAGCCGCCGCATGAATAATAGGATTTTGACTCAAAGTATTGGACTTCTGTCTTATTCATTTCTGATGCAAACACTTCTTGACAGAATAGTAGTACCCATGGTGAATTACGAGTTTAATACATCAACTCGATCATTGGACTTTTTACATGGTAAAGCGCACTTTATGTCTAATTTATCCAAGCTGTTGCAGTGGTCCCCCTATTCATCAGAAGCAGAGCTTCTGAAACAATTTGATGACATTGGATCTCATGGTACGAAAGTTATTGTGTACAATTTATGGCTCAATGATGATGGTAATTTGGAACTAGATTTTGATACAGATCCTGAGGATATTCTTATTGCTGGGGATAGAAAAAAGATTGACGCTCATCCTGCCTGGAAAACATTAAATGAGCAGCACATTTCAAATCGATTTCATTACTCTTTACGTGTTTATTCGTCCATATTGTACTTGAAGATGCCAGAAAACTTTAGAATTATATTGCGAGGGCAAATTGTGACACCACATAATATTGTTGATGATCTTAAACATTTCGATTTCATCTATTATAAACCACACGCTGATGGATCTGTACAGGGACAAGTGGTGACAACAATTGGATTTCTTAAAGAAGCTCCGCATGTCAATATCCATGGCTTCAATGTATATCACAAAAACCGTCTGATACTGCCATTTTGGCAAGTTGTGAGCCATCTAGACAGTAGGGGTAGAGGAGTTGTTGGCGTTCTGCAGGCAGATTTTGTCCAGCCTACTCATAATAAACAAGATTTTGAGAGAACTTCCCTGTTTCAAAAACTTGAAGTGCGCTTAAAGGAAATGACATGGGAATACTGGGATACTCATTGTACACTGATTGGGtataaggaaaagaagaagcttcAACCTAAAGTTACCACGCTGGATTCATCTCTTTGCAAGCCAGTTTGTATAGAAAAACCAGTCGcatctaataaaatttctctgcCTGTTGTTAAAACCAAAGAAGCCCAAGGGAAACTTGAGCAACTAACACCCAAGTCACATAGCAGATCAGAGCAAGGATTGCATGCTAAAAGAAAGGTAAATGAATTGAAAGACCTTCAGAAGGCGAAAAAACAGATCGTCACAATTCCTTCAAAAGACGTGATTGACCAAGAGTCTATAAACTTGATGCAAGAATACAATAAGCTCCATGCAAAATGTTTGGAATTtcaaaagaatgaagaagaaCTTAATCTCAAGGTGACACAGCTTCGAAGTGAAATACAAAAAGCTCAGGATGAGTACAGTCGGCTATTGGCTGAACTACAGTCCTTAGACACGGTGAAGGTGGAAAAGTA 3542 0.3899 MTDSSATLHWKFSQVFGERAPSEDLQEDDIITAIGFEKRGDYLALGDRGGRIIIFERDDKKNASNQQHARKDLEQTYFAPAQHPQFRYKTEFHSHEPEFDYLKSVEIEERINKLRWCITHRGSLFILSTNDKTIKLWKVKEHKVKQVKEMVPLPSVCSENALLAESSFMSEQENPHAANGYHLEWIKPLAQNLSQDIACKIAGMQDTVRTKCQKVYAHAHSFNINSISNNSDGETFISADDLRINLWNLDVNDQGFNIIDMKPSNMEDLTEVITSAEFHPLHCNLLAYSSSRGFIRLSDLRQAARCDDHGTRIFRHGDSHGLKSFFTEIITSISDIKFLNDGQHIISRDYMTMKLWDMRMDSSPVAIFKIHEHLRPKLAELYNNDRIFDKFECCFSGDGLHFATGSYGNLLRTFSPGTGTEETFRLEVSRNSDRKHLHQAAPKVRRSSLSNLTRGFYRHDNSSSNDFSCNLDSKLLHVAWHPTSNLVACAAESTASDKGLDIAFCIRDCPLFLSSSGIMIGTAEIDVVDLSSDDEVIPKEVKLESDVVGTSELQNETDKFRVANQYSEENRSSNVQSTGSSVLEQGMSPVDDTGLSSASPIGAAPICRQFWKAGQYDDGIGSTVAVQNAKNYLHVHPLFLHSNATSHKWAFGAIAELLDNAIDEAHNGKGATFVIVDKTLNPKDGSPALLIQDDGGGMDPETMRRCMSFGFSDKKSKSAIGQYGNGFKTSTMRLGADVIVFSRRMNNRILTQSIGLLSYSFLMQTLLDRIVVPMVNYEFNTSTRSLDFLHGKAHFMSNLSKLLQWSPYSSEAELLKQFDDIGSHGTKVIVYNLWLNDDGNLELDFDTDPEDILIAGDRKKIDAHPAWKTLNEQHISNRFHYSLRVYSSILYLKMPENFRIILRGQIVTPHNIVDDLKHFDFIYYKPHADGSVQGQVVTTIGFLKEAPHVNIHGFNVYHKNRLILPFWQVVSHLDSRGRGVVGVLQADFVQPTHNKQDFERTSLFQKLEVRLKEMTWEYWDTHCTLIGYKEKKKLQPKVTTLDSSLCKPVCIEKPVASNKISLPVVKTKEAQGKLEQLTPKSHSRSEQGLHAKRKVNELKDLQKAKKQIVTIPSKDVIDQESINLMQEYNKLHAKCLEFQKNEEELNLKVTQLRSEIQKAQDEYSRLLAELQSLDTVKVEK 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01382 1180 SUPERFAMILY WD40 repeat-like 28 492 IPR036322 GO:0005515
Bva06g01382 1180 SMART WD40_4 18 56 IPR001680 GO:0005515
Bva06g01382 1180 SMART WD40_4 209 248 IPR001680 GO:0005515
Bva06g01382 1180 SMART WD40_4 262 299 IPR001680 GO:0005515
Bva06g01382 1180 SMART WD40_4 98 138 IPR001680 GO:0005515
Bva06g01382 1180 SMART WD40_4 361 415 IPR001680 GO:0005515
Bva06g01382 1180 SMART WD40_4 319 357 IPR001680 GO:0005515
Bva06g01382 1180 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 524 1176 - -
Bva06g01382 1180 MobiDBLite consensus disorder prediction 567 595 - -
Bva06g01382 1180 Pfam Morc6 ribosomal protein S5 domain 2-like 881 1019 IPR041006 -
Bva06g01382 1180 Gene3D - 632 831 IPR036890 -
Bva06g01382 1180 Coils Coil 1135 1176 - -
Bva06g01382 1180 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 652 748 - -
Bva06g01382 1180 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 650 855 IPR036890 -
Bva06g01382 1180 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 524 1176 IPR045261 GO:0016887
Bva06g01382 1180 Gene3D - 10 502 IPR015943 GO:0005515
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 469 498 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 334 361 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 220 247 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 35 55 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 388 414 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 248 275 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 362 387 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 114 142 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 276 304 IPR000009 GO:0000159|GO:0019888
Bva06g01382 1180 Pfam WD domain, G-beta repeat 211 248 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01382 Bva-Chr6 10239745 10251635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01382 - - gmx:100795667 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01382 06 10239745 10251635 Bva06g01382 06 10239745 10251635 ECH