Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01375 ATGGCGAGCCACAATGAAGATGGCATTGAAGCTCTACGGAGCCTAAAATCCACAGATCCACGGTCATATCTGGAACCAAATCCAACGCTCTCTCAAACTGCTCGTGCTGCCTCACAATATATTTTCTCCTCCCTTAGACCCTTCTCCCAGAAATCGCCACTGGATCAACTCCTCGTCGACGGGTTTGATGCCGAGCAGATATGGCAGCAAATCGACCTCCAATCCCAGCCTATCATAGCCACTCTTCGTCGGCGAGTGAAGCACCTGCAGAAGGATcccaaagaaatttcaaagctGAAAATTGTTTTAGAAGGTGAGCAGGAGGTCGAGGAGAAGACTAGAGAAGAATTGAATGAAGAAAGCGATGATTTTGATGAGGCTCTGGATGACTTTGacgaagatgatgatgaagaggagCAAACAGAAGGCAAAGAAAGTGAACAAGTAGGAACAGAGAGTGAGGAGGAAGCGGGGGAAGAGAGTacggaggaggaggaagaggaaggTGATGCTGGTGGAGTTGaggataaatttttcaaaataaaggaACTAGCGAAGTACTtaaaggaggaggaggagaacTTGGAGAATGACGAAGCAGGACAGATAAAGAAGAAGGGTCATAGGTTGGACCGGGAAGAAGATGACGAGGAGGAGGAAGTGAGTGACGACGAAGGCAGCGAAGACGATGAAGACAGTGATGAGGCTGGCGATTTCGGGCTCGGTGACagtgaagaggaagaagaagaggactTGGAAAATGCAAGATATGAAGACTTTTTTGGAGCAAACAAGGACAAGagctcaaaaagaaaaaaaaaattgattcaggAATCTGAAGAGTCTGgtgatgaagaagatgacaTGGAAATTGGCGGACAGAACCAAGAGACCATTTCTACCCATGAAAAGCAACTGGAAAAAATTCAATCGAATATAGAACAGATGGAGAAAGCTAACTTACAGCAAAAAAACTGGATCATGCAAGGAGAGGTAACTGCTGACAAGAGACCCAAGAACAGTGCATTGGAAGTTGATCTGGACTTTGACCATAATATGAGACCTCCGCCTGTAATCACTGAAGAGGTTACAGCTTCAATTGAGGATATGATCCAGAAAAGGATCCTGGAGGGACGTTTCGATGATGTCCAAGGGCCTCCAAAGTTGCCATCTAAAGCCCCTCGGGAAATTAAGGAGTTGGATGAGAATAAAAGCAAGAAGGGTCTTGCAGAAGTTTACGAGGAAGATTACGTTCAGAAGACAAACCCTGCTATTGCTCCCTTGTCATTCAAAGATGAGCAGAAAAGAGAGGCAAGCATGCTGTTTAAGAAACTGTGTCTGAAGCTGGATGCTCTTTCTCATTTCCACTTCACTCCAAAACCAGTTATAGAGGACATGTATGTTCAAGCTAATGTTCCTGCTCTGGCAATGGAAGAAATTGCACCTGTGGCTGTTTCAGATGCAGCTATGTTGGCTCCTGAAGAAGTCTTTGCCGGTAAAGGATCAATAAAGGAAGAAGTAGAACTtacaaaggaagagaggaaaaggagaagagctaacaagaaaagaaaatttaaagCTGTTGCAGCAGAAAGGATGGCAAAGAAGCCACGGGAGGATACATTACCCAGTCAAATAGATGGCTA 1646 0.3919 MASHNEDGIEALRSLKSTDPRSYLEPNPTLSQTARAASQYIFSSLRPFSQKSPLDQLLVDGFDAEQIWQQIDLQSQPIIATLRRRVKHLQKDPKEISKLKIVLEGEQEVEEKTREELNEESDDFDEALDDFDEDDDEEEQTEGKESEQVGTESEEEAGEESTEEEEEEGDAGGVEDKFFKIKELAKYLKEEEENLENDEAGQIKKKGHRLDREEDDEEEEVSDDEGSEDDEDSDEAGDFGLGDSEEEEEEDLENARYEDFFGANKDKSSKRKKKLIQESEESGDEEDDMEIGGQNQETISTHEKQLEKIQSNIEQMEKANLQQKNWIMQGEVTADKRPKNSALEVDLDFDHNMRPPPVITEEVTASIEDMIQKRILEGRFDDVQGPPKLPSKAPREIKELDENKSKKGLAEVYEEDYVQKTNPAIAPLSFKDEQKREASMLFKKLCLKLDALSHFHFTPKPVIEDMYVQANVPALAMEEIAPVAVSDAAMLAPEEVFAGKGSIKEEVELTKEERKRRRANKKRKFKAVAAERMAKKPREDTLPSQIDG 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01375 548 Coils Coil 100 134 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 1 30 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 510 548 - -
Bva06g01375 548 Coils Coil 299 319 - -
Bva06g01375 548 Coils Coil 504 524 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 214 255 - -
Bva06g01375 548 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 3 538 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Bva06g01375 548 MobiDBLite consensus disorder prediction 107 177 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 115 143 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 256 280 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 190 213 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 526 548 - -
Bva06g01375 548 Pfam Mpp10 protein 49 529 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Bva06g01375 548 MobiDBLite consensus disorder prediction 152 172 - -
Bva06g01375 548 PIRSF snoRNP_Mpp10 1 545 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Bva06g01375 548 Coils Coil 181 201 - -
Bva06g01375 548 MobiDBLite consensus disorder prediction 190 308 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01375 K14559 - gmx:100817724 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01375 06 10212181 10217122 Bva06g01375 06 10212181 10217122 ECH