Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01371 ATGCAATTGTTAAATATCAAGGCTTTCGTGAATTTGCGTTTACCGGGTACGGGAAGCTCCGGTTTCGCGGACTCTGACGCGGGGTTGAGGAGGCAATGGGTTACTTTCAGAAGTCCGAGGAGAACGAGTGGGAGCATAGCATGTTCGGCAGAAAGAAATGGTAATGGCGGGGAAGAGAATCGGAATACGAGTCACAGTCCCAGTCTAAGCTCGAGCTCGTTTCTCTCTCGAAGCCACACCTACGCACGCTTGAAGCAGCAGATGGAGGTAGCTGCCAAATGCGAGgACTACAAGGAGGCAGCAAGGATTCGTGATTCGATTAGGTTATTTGAAGACGAGGAGCCCGTTTTGCACCTACGGCGATTAATGAAAGAAGCAATTGTCGATGAGAAGTTTAAGgATGCAGCCAGATATCGTGATGAGCTAAAAGCATTTGCTCCGTTCTCTCTCTTAAAATGTTCCAGTGATGTTACAACCTTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAAGGTAGAAGTCAGCCCTCAAAGGGACAGTACTTCTTTGCATACAGAATAAGAATTACAAACAACTCATCTCGCCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACTGATGCTAatgcaaaaacagaaaatgtcTGGGGAATCGGGGTTGTTGGTGAACAGCCAGTCCTACACCCTAGGACTTGTTTTGAATACTCTACAGTATGCCTATTATGCACACCTAGTGGTAGAATgGAAGGTGACTTTGAGATGATACAAGTTGATAGAGTAGGCTCACCATCTTTTAAAGTGGCTGTTGCccccttttctctctccttacTAGGAGATGATGACGGTCATACTATTTG 863 0.4311 MQLLNIKAFVNLRLPGTGSSGFADSDAGLRRQWVTFRSPRRTSGSIACSAERNGNGGEENRNTSHSPSLSSSSFLSRSHTYARLKQQMEVAAKCEDYKEAARIRDSIRLFEDEEPVLHLRRLMKEAIVDEKFKDAARYRDELKAFAPFSLLKCSSDVTTLGIRVQVRSVYIEGRSQPSKGQYFFAYRIRITNNSSRPVQLLRRHWIITDANAKTENVWGIGVVGEQPVLHPRTCFEYSTVCLLCTPSGRMEGDFEMIQVDRVGSPSFKVAVAPFSLSLLGDDDGHTI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01371 287 ProSiteProfiles UVR domain profile. 113 148 IPR001943 GO:0005515
Bva06g01371 287 Gene3D ApaG domain 152 285 IPR036767 -
Bva06g01371 287 ProSiteProfiles ApaG domain profile. 156 283 IPR007474 -
Bva06g01371 287 Pfam UvrB/uvrC motif 83 111 IPR001943 GO:0005515
Bva06g01371 287 Pfam UvrB/uvrC motif 118 144 IPR001943 GO:0005515
Bva06g01371 287 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 79 111 IPR036876 -
Bva06g01371 287 SUPERFAMILY ApaG-like 158 277 IPR036767 -
Bva06g01371 287 ProSiteProfiles UVR domain profile. 78 113 IPR001943 GO:0005515
Bva06g01371 287 MobiDBLite consensus disorder prediction 44 74 - -
Bva06g01371 287 Pfam ApaG domain 174 257 IPR007474 -
Bva06g01371 287 PANTHER OS05G0170800 PROTEIN 29 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01371 Bva-Chr6 10191071 10194202 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01371 - - twl:120003738 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01371 06 10191071 10194202 Bva06g01371 06 10191071 10194202 ECH