Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01365 ATGAAGGCGATGAAGATTACTACCACAACGCTACCAATACCAAGAACTACCTTGCCCCGCCCAGATCAGCCTTCGCTACTTGTCCTGATTTTGTTTGGCTTCAAAGAAAATGCTGGTAAATTGAATATGTTTAGAGGGGACAATGCATATCCCATGTTCTCCACTTCGCTTGGGGGAAACAGATTGCAATATGATCATGACGGGCTGCCTCAGCTGCAGTTATTTGGAGACCTTCCAGTTGGTTGCAGTGTTGGTTCCCTAAATTACGTGGGAGACGAGAATAATCCAATGATGGAACCAATTAAAAAAGGTATGGAGGTAGGACCACTGTCTAGACAGCCAAAACATCCGATATCTCTGAACAGCAAATCCTTCCAAGATGAAGTTGGTCGTTCTGGATATGCCCCAATCCTGGTCTCCACTGGGCTGAAGCTTTCATACGAGGAAGATGAGCATAATTCTTCTGTTAGTTGTGAAGGGTTAAAAGTTGCACTACCAATAATTTCGTCTTTTGGTGATAATTTGATGCCTGAGATTGATCAGCAGAAAGAGGAGcttgatttttatatgaaatttatgGAGGAGAACATCATAAAAGGTGTGAGGGAGCTGAAGCAAagacacatggtttcttttcttaatgcCGCTGACAAAGGAATTAACAGTAAGTTGCATGAGAAAGAGTCAGAAATTCTGAGCTTGAACCACAAGAACAAGGAACTGTTAGAGAGGATAAAGCAGGTTAGCCGGGAAGTTCACACCTGGCACTACAGGGCCAAGTATAATGAATCTGTCATCAATGTCTTGAAGAATAATTTGCAGCAAATCATGGCACAAAGTGTGATGCATGGCAAAGAAGCTTGTGGTGATAGTGAGATAGAGGATGTGGCCTCTTGTTCGAATATAAATCATCTAGGAGCTATGGTCTATACTGGAGATTTGGAAACTATGAAGCATATGAATTGCAGGGCTTgcaaagtgaaggaaaaatctGTTCTGTTGTTGCCTTGCAGGCATCTGTGTCTATGTAAGGATTGTGAAGTATTTATTGATGTATGCCCTATCTGCGGGATGATGAAGACTGCAGGTATTGAAGTTTTTATGTCTTA 1109 0.3995 MKAMKITTTTLPIPRTTLPRPDQPSLLVLILFGFKENAGKLNMFRGDNAYPMFSTSLGGNRLQYDHDGLPQLQLFGDLPVGCSVGSLNYVGDENNPMMEPIKKGMEVGPLSRQPKHPISLNSKSFQDEVGRSGYAPILVSTGLKLSYEEDEHNSSVSCEGLKVALPIISSFGDNLMPEIDQQKEELDFYMKFMEENIIKGVRELKQRHMVSFLNAADKGINSKLHEKESEILSLNHKNKELLERIKQVSREVHTWHYRAKYNESVINVLKNNLQQIMAQSVMHGKEACGDSEIEDVASCSNINHLGAMVYTGDLETMKHMNCRACKVKEKSVLLLPCRHLCLCKDCEVFIDVCPICGMMKTAGIEVFMS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01365 369 ProSiteProfiles Zinc finger RING-type profile. 322 356 IPR001841 -
Bva06g01365 369 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 312 369 IPR013083 -
Bva06g01365 369 Pfam Zinc finger, C3HC4 type (RING finger) 320 357 - -
Bva06g01365 369 PIRSF SBP1_RNase_bind 51 369 IPR017066 -
Bva06g01365 369 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BOI-LIKE 47 368 - -
Bva06g01365 369 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 47 368 IPR017066 -
Bva06g01365 369 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01365 Bva-Chr6 10169004 10172119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01365 322 356 Miscellaneous Gene Families AT4G39050 48.571 7.60e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01365 K19042 - qsu:112040841 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01365 06 10169004 10172119 Bva06g01365 06 10169004 10172119 ECH