Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01354 ATGGAGCATAGAATTGATCGATGTGGGTTTATTCCAGTGATGAGAGTTGATGAGGTTTTAAGTCGGTGTGGGACTTCAACCCCTCACAACTCGAACAAGCAAGAGTTGGACAATCAGTCCAACCGTATGGATGAGAAATCGGTCCCAGGGACATTAAGCAACGAAGAATCAATGGTTTCCGATTGTGAAAGTGGTGTTTGCGGAGCCAATCGTGTTCAACGCCAGCTGTTCGGTGAAGGGTTTGAAAGACTGGCAGAAGGTGACAGGGTTCATGACCTCATTCAGAGAAGGTTCATTCTGGGTTTGGGCTTAGTTGGTGCAAAAACAGAGGTTGTTGCAATTCATAAGAATACGTGTTCTAGCACTATGGGGCAGGCAAGGGCTCAGTCATTCCAGATTTATATGCAAGCAATGTCAAAGAAGCGTGATGGTAATGCCAACGTTAAGTATGCATGGTATGGCACTTCTGGTAGggaagaagtagaagaaatcATTTCGCATGGTTTTGGTCATGCTACTCATTGTGGCAAATCCCACAACAATAATGGGCTCTATGGCTGCGGAGTATATCTGTCTCCAGATGATTCTCCTCTAGAAAGTGTGAAAAGCACTGTTGTTGACGAAGGAAGTCTACGACACTTGCTATTGTGTCGGGTTATTTTGGGGAGAGCGGAGCTTGTTCATCCTGGTGCTGAGCAATGTCATCCTAGTTCTGATGATTACGATTCTGGAGTGGACAACATTTTATCTCCTAAGAAGTACATTGTTTGGACTACCCGTATGAACACGCATGTTTTGCCGgaatatattataagtttcAGAGTTCCTTGCTTGAAAGACCTTATGAAAATTGGAGAAACTTTTAGGAAACCTTCTTCGCCTTGGATACCATTTTCAGCACTGATTTCTGTGCTGTCGAAGGTTTTGCCTCCATCTGCAATTGAGTTGAtttcaaaatatcataaatatcaCAAAGAAAAGAAGATTTCACGAAATGAACTTACACTGAAAGTAAGACAAGTAGCAGGAGACAAGTTGTTGATTGCAGCCATAAAATCTTTTAGAGCCAAGAAGACACCTGCCAGCTTTCGGCAAACAAGGTCAGATAATGAGAGCAGGACAGCTGGGAACATGGATGAAAATTGCTTCTCAAGAGGCTCTACATCGGTGTA 1172 0.4181 MEHRIDRCGFIPVMRVDEVLSRCGTSTPHNSNKQELDNQSNRMDEKSVPGTLSNEESMVSDCESGVCGANRVQRQLFGEGFERLAEGDRVHDLIQRRFILGLGLVGAKTEVVAIHKNTCSSTMGQARAQSFQIYMQAMSKKRDGNANVKYAWYGTSGREEVEEIISHGFGHATHCGKSHNNNGLYGCGVYLSPDDSPLESVKSTVVDEGSLRHLLLCRVILGRAELVHPGAEQCHPSSDDYDSGVDNILSPKKYIVWTTRMNTHVLPEYIISFRVPCLKDLMKIGETFRKPSSPWIPFSALISVLSKVLPPSAIELISKYHKYHKEKKISRNELTLKVRQVAGDKLLIAAIKSFRAKKTPASFRQTRSDNESRTAGNMDENCFSRGSTSV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01354 390 MobiDBLite consensus disorder prediction 364 390 - -
Bva06g01354 390 SUPERFAMILY ADP-ribosylation 114 274 - -
Bva06g01354 390 ProSiteProfiles PARP catalytic domain profile. 68 293 IPR012317 GO:0003950
Bva06g01354 390 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 52 366 IPR044964 -
Bva06g01354 390 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 52 366 - -
Bva06g01354 390 MobiDBLite consensus disorder prediction 23 55 - -
Bva06g01354 390 Gene3D - 81 275 - -
Bva06g01354 390 Pfam RCD1-SRO-TAF4 (RST) plant domain 290 355 IPR022003 -
Bva06g01354 390 ProSiteProfiles RST domain profile. 289 360 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01354 Bva-Chr6 10076501 10079830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01354 - - rcu:8289004 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00368 05 1827691 1830124 Bva06g01354 06 10076501 10079830 BWGD