Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01352 atggctcTGAATTTGCTTTCTCCAGCTGAAGTCAactctctatttttcttcgATTCCTTCAAATCTAACAACCTGGCCAAATTCCCAGAAGGTTTTGCtttgaagagaaaagattGCAGAGCAACAGTTGGTAGACGAATTTATTGCTCCGTGCAGACACCACCTCCAGCCTGGCCAGGACGAGCGGTTCCTGAGACAGGTCGTAAGACATGGGTGGGTCCAAAGCCCATCTCAATCGTAGGATCTACTGGTTCCATTGGAACTCAGACTCTAGATATAGTGGCTGAGAATccagataaatttaaagttgtgGCTCTAGCAGCTGGTTCAAACATTACTCTTCTTGCAGATCAGATAAAGACATTCAAGCCTCAACTTGTAGCAGTTAGAAATGAGTCCCTACTTGATGAACTCAAGGATGCTTTGGCTGATGTTGATCAAAAACCTGAGATCATCCCTGGAGAGCAAGGAGTCATTGAGGTTGCTCGTCACCCTGATGCAGTCACTGTAGTTACTGGAATAGTTGGTTGTGCAGGACTAAAGCCAACAGTTGCTGCAATAGAAGCCGGGAAAGACATAGCTTTGGCCAACAAAGAAACACTAATAGCTGGAGGTCCTTTTGTTCTCCCTCTGGCTCACAagcataatataaaaattcttccAGCTGATTCAGAACATTCTGCCATTTTTCAGTGTATCCAGGGATTGTCAGAGGGTGCACTTCGGCGGATCATTTTGACCGCATCTGGTGGTGCTTTCAGAGATTTGCCTgttgataaacttaaagatGTTAAAGTTGCTGACGCATTAAAGCATCCCAACTGGACTATGGGAAAAAAGATAACTGTTGACTCTGCTACCCTTTTCAACAAGGGTCTAGAAGTAATCGAGGCTCATTACTTGTTTGGAGCTGAATACGATGATATTGAGATTGTCATTCATCCACAGTCAATCATACATTCAATGGTTGAGACACAGGATTCATCTGTTCTGGCACAGTTGGGTTGGCCTGACATGCGCCTACCAATCCTTTTTACAATGTCTTGGCCAGACAGAATTTATTGCTCTGAAGTAACTTGGCCACGCCTTGATCTTTGCAAGCTTGGTTCACTAACATTTAAAGTTCCTGATAACGTGAAATATCCATCCATGAATCTTGCCTACGCTGCTGGGCGTGCAGGAGGCACTATGACGGGAGTTCTTAGTGCAGCAAATGAGAAAGCTGTAGAACTGTTTATTGATGAAAAGATTGGTTATCTGGATATATTCAAGGTTGTGGAGCTAACATGTGAAAAGCATCGAGATGAACTGGTTGCTTCGCCTTCGCTTGaggaaattattcattatGACCTGTGGGCTCGAAAATACGCTGATAGTTTACAAAGCTCTTCCAGTTTCACTAGTATTCCTGCATG 1415 0.4106 MALNLLSPAEVNSLFFFDSFKSNNLAKFPEGFALKRKDCRATVGRRIYCSVQTPPPAWPGRAVPETGRKTWVGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNITLLADQIKTFKPQLVAVRNESLLDELKDALADVDQKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLSEGALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWTMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILFTMSWPDRIYCSEVTWPRLDLCKLGSLTFKVPDNVKYPSMNLAYAAGRAGGTMTGVLSAANEKAVELFIDEKIGYLDIFKVVELTCEKHRDELVASPSLEEIIHYDLWARKYADSLQSSSSFTSIPA 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01352 471 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 219 302 IPR013644 GO:0005515
Bva06g01352 471 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 200 337 - -
Bva06g01352 471 PIRSF Dxp_reductoisomrs 74 466 IPR003821 GO:0008299|GO:0030604|GO:0046872
Bva06g01352 471 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 75 457 IPR003821 GO:0008299|GO:0030604|GO:0046872
Bva06g01352 471 Gene3D - 69 223 - -
Bva06g01352 471 Pfam DXP reductoisomerase C-terminal domain 334 455 IPR026877 -
Bva06g01352 471 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 464 IPR003821 GO:0008299|GO:0030604|GO:0046872
Bva06g01352 471 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE-RELATED 1 464 - -
Bva06g01352 471 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 367 461 IPR036169 -
Bva06g01352 471 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 223 IPR036291 -
Bva06g01352 471 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 77 460 IPR003821 GO:0008299|GO:0030604|GO:0046872
Bva06g01352 471 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 77 205 IPR013512 GO:0070402
Bva06g01352 471 Gene3D - 379 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01352 Bva-Chr6 10066883 10071013 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01352 K00099 - jre:108991479 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01352 06 10066883 10071013 Bva06g01352 06 10066883 10071013 ECH