Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01342 ATGAGTAATCACTTCATCTTGTTGCTCTTGTCGGCGTTATCACTCTCATTTTTCCATGTTTCTGTAGCAGTCGCAACCAGAGGCAGAGGCAAGGAGATTTTACAAAGACCAGGCATTGAAAGCAACCCATTCACTCCTAGAGCATCACTCAATCGGTATTGGAACATACACGTCTCAAACAAGCTCCCAATCCcccatttcttcctttctaaaGCCTCTCCTCTCAGCCCTCACGACTATGCATTCCTCACAAAGCTCGTTGCTCGTAAATCCCTCTCTTCAACTTCAAATTGGAGCTTGGAGTCCTTTTGCTCCTTAGCCAACTTGCACTGCTTCTTTGACTCGTCAACATCATACCCAAATGCACTAGTTAACCGCACCAACGGCGACGCCAACTTCGCTCTGTACACCGACAAACACTTCACAAACTATGGTTCGTCCAGAATCGGTTCAGTTGACTCTTTTAAGAACTACTCGGAGGGGATAAATACCCCCAACGACTCATTCAAGAAGTACAGCCAGGCTTCTATCCGCCACGGTGAGCAGTTCGCAAACTACGCAGAAAACGGCAATGTAGCAGATACTAACTTCACCAGTTACGCTTCCAGAGCTAAACAAGGCTCCGGTAACTTCAACAACTACGACAAAACGGTTAACGTTCCCAATCTTCAGTTCGCTTCCTATGACTCCTCCGCCAACAGTCATGACCTTTCTTTCTCCAGCTATGGCAACGACACCAACTCCGGCACTCAATCATTTGTAAGCTACAGCAAGAATGTCAATGTGGGCCACACAGAGTTCAGCAACTACGCCGATAGCTCCAATATATTGCAATCCGATTTCACGGGTTACGGCGAGTCGGGTCACGGTGCAAACGACTCCTTCAAGGCCTACAGTTTCTCGGGTAATAACCCGCACGCCAATTTCAAAAACTACGGTACCGGGGCCAACTCCGGTACCGATACGTTTATGAGCTACCGGAACCGTGCCAATGTTGGCGAGGATAACTTCCAAACCTACGCTAGGAATTCCAAGTCGGGTTCAGCGTCATTCGCCAACTATGGCCAATCTTTCAACGTGGGTAATGATACATTCAAGGATTACGGTAAAGGATCCGCGGGTGGTACCACAATCGGGTTCAAGTCATACGGATTGGGCCGCACATTCAAAGATTATAATAAGCAGGTTGTGTCATTTTCAGAGTACAACAATTTCAGCGGCCAAAATCGTGATGGTCAGGGCAAAATTGCGAATAGATGGGTAGAGCCGGGCAAATTTTTCAGGGAATCCATTCTGAAGGCAGGGAATGTAATGGCGATGCCCGACATCAGAGACAAGATGCCCTCGAGGTCGTTTTTACCAGGCACAATTTCGTCAAAATTACCCTTCTCGTCCTCACAGTTGTCGCAGATCAAAGAAATGTTTCGCGCACGGGAGAACTCGGCGACGGAGCACGTGATCGCGAATGCATTGGCGGAGTGCGAGCGGGCTCCGAGCCGGGGAGAGACGAAACGGTGCGTAGGATCCGCGGAGGAGATGATACAGTTCGCAGTCTCGGTGCTGGGTCCCAATGTGGTGGTGAGGACAATCGAGAATGCGAAGGGATCAAGCAAGAGCGTGATGATTGGAAGGGTCAAGACGATTAACGGTGGAAAAGTGACTAAATCGGTCTCATGTCATCAGAGTTTGTACCCGTACCTATTGTATTATTGCCACTCTGTCCCTAAAGTGAGGGTGTACGAAGCAGATATACTTGACGTGGACACCAAGCGGAAGATCAATCACGGAGTAGCCATTTGTCATCTGGACACATCAGCATGGGGCCCAGAGCACGGGGCCTTCATAGCACTGGGCTCCACCCCTGGAAAAATTGAAGTGTGCCACTGGATTTTCGAGAACGACATGACTTGGACAAGCGCAGAgtg 1925 0.4857 MSNHFILLLLSALSLSFFHVSVAVATRGRGKEILQRPGIESNPFTPRASLNRYWNIHVSNKLPIPHFFLSKASPLSPHDYAFLTKLVARKSLSSTSNWSLESFCSLANLHCFFDSSTSYPNALVNRTNGDANFALYTDKHFTNYGSSRIGSVDSFKNYSEGINTPNDSFKKYSQASIRHGEQFANYAENGNVADTNFTSYASRAKQGSGNFNNYDKTVNVPNLQFASYDSSANSHDLSFSSYGNDTNSGTQSFVSYSKNVNVGHTEFSNYADSSNILQSDFTGYGESGHGANDSFKAYSFSGNNPHANFKNYGTGANSGTDTFMSYRNRANVGEDNFQTYARNSKSGSASFANYGQSFNVGNDTFKDYGKGSAGGTTIGFKSYGLGRTFKDYNKQVVSFSEYNNFSGQNRDGQGKIANRWVEPGKFFRESILKAGNVMAMPDIRDKMPSRSFLPGTISSKLPFSSSQLSQIKEMFRARENSATEHVIANALAECERAPSRGETKRCVGSAEEMIQFAVSVLGPNVVVRTIENAKGSSKSVMIGRVKTINGGKVTKSVSCHQSLYPYLLYYCHSVPKVRVYEADILDVDTKRKINHGVAICHLDTSAWGPEHGAFIALGSTPGKIEVCHWIFENDMTWTSAE 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01342 641 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 7 640 - -
Bva06g01342 641 SMART BURP_2 424 640 IPR004873 -
Bva06g01342 641 Pfam BURP domain 426 638 IPR004873 -
Bva06g01342 641 ProSiteProfiles BURP domain profile. 426 640 IPR004873 -
Bva06g01342 641 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01342 Bva-Chr6 10019399 10021725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01342 - - gmx:100787394 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01342 06 10019399 10021725 Bva06g01342 06 10019399 10021725 ECH