Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01322 ATGGGAGAAAATAAACGAAAAAGAGGACGTAAACCCAAAAACACCTCCCCTGAAGCCCTAGACTTACCCGCCACTAGTTCCGCCCCGAACAACAATAATCCTTCTTCAATGGATGAGGTTTTCTCTGTCGGCAATGTTGAACTTATCGATACCACAGCTTCTCCCCACTACCGTCGCCGCCGTGGTCGACCCAAGAAGCTGCCCAAGCACTCCGACAAGCCCGAGAAGCCTCCTGTGATTTCTACCACTAGACGGGTGCCTCGCTCCGTCGATAATGTTGGCGATTTTATGGTTCCCGGTGAAGTAGGGGGTCCCACGGCATTGGCGGTGGCCATGGAAGCCGGTCCAGTGTGGGATAGCGTTTCGCCCAGGGTGGTGCCGGCGATGGACTCCGTTGTCAAGGTGTTCTGTGTGCACACGGAACCTAATTTCTCGCTTCCGTGGCAGAGGAAAAGGCAGTATAGCTCCAGCAGTAGTGGATTTGTGATTAGTGGGAGGAGAGTGCTGACCAATGCGCATTCAGTCGAGCACTACACCCAGGTCAAGCTTAAGAAACGCGGCTCTGATACCAAGTACTTGGCCAAGGTGCTTGCCATTGGGACCGAGTGTGATATTGCCATGCTCAcagttgatgatgatgaattcTGGCAAGGGATGTCACCCGTTAAGTTTGGGGATTTGCCTACGCTTCAAGATGCAGTTACTGTTGTGGGCTATCCAATTGGCGGAGACACTATTTCTGTGACAAGTGGTGTTGTATCACGCATTGAGATCCTATCATATGTCCATGGGTCAACTGAACTTCTAGGTTTACAGaTAGATGCTGCCATAAACTCTGGCAATTCTGGTGGTCCTGCATTTAATCATAAAGGAAATTGTGTGGGAATTGCATTTCAGTCCCTTAAGCACGAAGATGTTGAGAATATAGGTTACGTAATCCCAACACCAGTCATCAAGCATTTCATTCTGGACTATGAGAAGAATGGAGCATATACAGGGTTCCCTATCCTTGGAGTTGAGTggcagaaaatggaaaatcctGATCTGCGCATGGCAACGGGCATGAAGCCTGATCAGAAGGGCGTTCGGATTAGAAGAATTGATCCAACTGCTCCAGAATCGAAGGTTTTGCAAGCATCAGATGTTATCCTTAGCTTTGATGGGATTGATATTGCAAATGACGGAACCGTTCCATTTCGCCATGGGGAGCGCATTGGATTCAGTTATCTCGTATCCCAGAAATATACTGGGGATAATTCAGTAATCAAAATATTGCGCAATTCAGAGATTTTCCAATTTGACATTAAACTTGGTAGTCACAAAAGGCTCATTCCAGCACACAGCAAGGGCAGGCCTCCCTCGTACTATATTATTGCCGGATTTGTTTTTACAACTGTGTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTCTTGGAAAAATTATTGCATTCATTACCACAATCACCAGATGAACAGCTCGTTGTAGTCTCTCAGGTGCTGGTAGCTGATATAAATATTGGCTATGAGGATATAGTTAACACTCAGGTCCTTGCTTTCAATGGTAAACCTGTGAAAAATCTTAAGAGCTTGGCAAGCATGGTAGAGAGTTGCGATGATGAGTATCTAAAATTCGATTTAGAATACGATCAGATAGTGGTCCTTAACACAAAGACTGCAAAAGCAGCTACTCTAGATATTCTTACAACACACTGCATACCATCAGCAATCTCCGATGATCTTAAGTCATG 1778 0.4494 MGENKRKRGRKPKNTSPEALDLPATSSAPNNNNPSSMDEVFSVGNVELIDTTASPHYRRRRGRPKKLPKHSDKPEKPPVISTTRRVPRSVDNVGDFMVPGEVGGPTALAVAMEAGPVWDSVSPRVVPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVISGRRVLTNAHSVEHYTQVKLKKRGSDTKYLAKVLAIGTECDIAMLTVDDDEFWQGMSPVKFGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNHKGNCVGIAFQSLKHEDVENIGYVIPTPVIKHFILDYEKNGAYTGFPILGVEWQKMENPDLRMATGMKPDQKGVRIRRIDPTAPESKVLQASDVILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDNSVIKILRNSEIFQFDIKLGSHKRLIPAHSKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLEKLLHSLPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLASMVESCDDEYLKFDLEYDQIVVLNTKTAKAATLDILTTHCIPSAISDDLKS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01322 592 Gene3D - 117 215 IPR043504 -
Bva06g01322 592 PRINTS HtrA/DegQ protease family signature 160 172 IPR001940 GO:0004252|GO:0006508
Bva06g01322 592 PRINTS HtrA/DegQ protease family signature 188 208 IPR001940 GO:0004252|GO:0006508
Bva06g01322 592 PRINTS HtrA/DegQ protease family signature 267 284 IPR001940 GO:0004252|GO:0006508
Bva06g01322 592 PRINTS HtrA/DegQ protease family signature 376 388 IPR001940 GO:0004252|GO:0006508
Bva06g01322 592 PRINTS HtrA/DegQ protease family signature 230 254 IPR001940 GO:0004252|GO:0006508
Bva06g01322 592 SUPERFAMILY PDZ domain-like 360 442 IPR036034 GO:0005515
Bva06g01322 592 MobiDBLite consensus disorder prediction 19 40 - -
Bva06g01322 592 CDD PDZ_serine_protease 335 435 - -
Bva06g01322 592 MobiDBLite consensus disorder prediction 1 82 - -
Bva06g01322 592 Gene3D - 443 592 IPR046449 -
Bva06g01322 592 Pfam PDZ domain 444 589 IPR041517 -
Bva06g01322 592 PANTHER PROTEASE DO-LIKE 9 3 591 - -
Bva06g01322 592 SUPERFAMILY Trypsin-like serine proteases 125 329 IPR009003 -
Bva06g01322 592 Pfam Trypsin-like peptidase domain 159 296 - -
Bva06g01322 592 Gene3D - 334 442 IPR036034 GO:0005515
Bva06g01322 592 PANTHER - 3 591 - -
Bva06g01322 592 Gene3D - 216 326 IPR043504 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01322 Bva-Chr6 9951036 9955617 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01322 K25897 - gmx:100817187 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01322 06 9951036 9955617 Bva06g01322 06 9951036 9955617 ECH