Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01312 ATGTTCCCTCGCAGTTATTTGGCATGGCTTCTTATGTGCCTGTTCCTGCTTTCGACCTTCTTCCACCCCTCCATGTCCGATTCAGAATCCCGCTGGGCCGCCAAGGGAAAGCGCATGAGAGAGAAAGTCCGTAAGATGTTCTACCATGCGTATGACAACTACATGATTCATGCATTTCCGCATGATGAGCTAAAGCCGCTCACCAAAACTTTCACAGACTCTCTAAGTGAGCTGGGAAATTTGAAGCTTGAACACTTGCCTCAAGAATACAGTGGATCTGCCCTTACACTGATCGAATCATTGTCTAGCCTTGTTATACTGGGTAACAACACTGAATTTGAGAGGGCTGTGCTCTGGCTTTCTGAAAACCTAACTTTTGATGTGGATGCACGCATAAATCTCTTTGAGTGTAACATAAGAGTTCTTGGTGGACTTGTCTCTGCTCATCTACTTGCAACTGATTCTACAAACAACCTTTTTAATGAAGCTTACAACAATCAGCTGTTGGGACTGGCTGAAGATTTAGGAAAACGCTTTCTACCAGCTTTCAATACACCGACTGGATTGCCATATGCATGGATTAACTTAAAGTATGGAGTGATGGAGAATGAGACAACAGAAACAAGCACTTCAGGGTGTGGTTCCCTAATTCTTGAAATGGGCGCTTTATCAAAAATGACTGGTGACCCCCGATTTGAATCAGCAGCTCTACGTGCTCTTCGTAAGTTATGGAGCATGCGGAGTTcgttaaatttatttggaaCAACACTGGATGTGGCAACTGGGGAATGGATTGAGTTTTCAACAGGAATTGGAGCTGGGGTGGATTCATTCTACGAGTATCTACTTAAAGCCCATATCCTTTTCGGGAAGGAGGAGTTTTGGAGAATGTTTCATTCTGCTTATATTGCTGTGCAGAAATATTTTAGACACGGTCCTTGGTATCATGAAGCTGACATGAGGACGGGAAGAGCAACTTACTGGCAGCTTACAAGTCTTCAAGCATTTTGGCCTGGTTTGCAGGCTCTCATTGGGGATATTGCAGCTGCTAATTCATCGCACCGTGAGTTCTTCTATGTGTGGGAGAAATTCGGAGTTCTACCAGAGAGGTATTTGCTGGACCACCAGATCCTGCATCCTACTGagaaatattatcctttgCGCCCTGAATTGGCTGAGTCAACATTCTACTTATATCAAGCAACTAAAGATCCATGGTACTTTGAAGTGGGTGAAACAATGGTAAATTCCCTTAATTCACACACCAAAGTGGAAGGTGGGTTTGCAAGCGTCAGGGATGTGACAACTATGCAGTTGGAAGATCATCAACATAGTTTTTTCCTTGCTGAAATGTGCAAATACTTGTATCTTCTATTTGATGATTCGTTCTTAACTGATcgtaattatatatttactaccGAAGGTCACCCCCTTCCAGTACTAAGCTCTTGGCATGAAAGGCTTCCAGAAACTTATATTCCAACTAACTGGACTTGCATGAAGGATCAACACGCTAGCCGAATCAGTGCATTGTCTCTGCAAGTTTGTCCTGctttaaatctaaattcagGCCAAAATAATGGACAAGACGCAGATCATGTAGCATGGCTGGTTATTGTGGATTATGGCTCTTGGTATGATATCATGTACAACAGAAATTCTTTTGGCAacta 1673 0.4166 MFPRSYLAWLLMCLFLLSTFFHPSMSDSESRWAAKGKRMREKVRKMFYHAYDNYMIHAFPHDELKPLTKTFTDSLSELGNLKLEHLPQEYSGSALTLIESLSSLVILGNNTEFERAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLATDSTNNLFNEAYNNQLLGLAEDLGKRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKMTGDPRFESAALRALRKLWSMRSSLNLFGTTLDVATGEWIEFSTGIGAGVDSFYEYLLKAHILFGKEEFWRMFHSAYIAVQKYFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQALIGDIAAANSSHREFFYVWEKFGVLPERYLLDHQILHPTEKYYPLRPELAESTFYLYQATKDPWYFEVGETMVNSLNSHTKVEGGFASVRDVTTMQLEDHQHSFFLAEMCKYLYLLFDDSFLTDRNYIFTTEGHPLPVLSSWHERLPETYIPTNWTCMKDQHASRISALSLQVCPALNLNSGQNNGQDADHVAWLVIVDYGSWYDIMYNRNSFGN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01312 557 Gene3D - 28 490 IPR012341 GO:0005975
Bva06g01312 557 Pfam Glycosyl hydrolase family 47 46 479 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PANTHER ALPHA-MANNOSIDASE I MNS5 15 532 - -
Bva06g01312 557 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 15 532 IPR044674 GO:0004571|GO:1904380|GO:1904382
Bva06g01312 557 SUPERFAMILY Seven-hairpin glycosidases 38 493 IPR036026 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PRINTS Glycosyl hydrolase family 47 signature 445 465 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PRINTS Glycosyl hydrolase family 47 signature 386 410 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PRINTS Glycosyl hydrolase family 47 signature 272 289 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PRINTS Glycosyl hydrolase family 47 signature 131 149 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PRINTS Glycosyl hydrolase family 47 signature 181 200 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PRINTS Glycosyl hydrolase family 47 signature 329 345 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bva06g01312 557 PRINTS Glycosyl hydrolase family 47 signature 46 66 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01312 Bva-Chr6 9891222 9895822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01312 10 534 Glycoside Hydrolase AT1G27520 78.788 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01312 K10084 - tcc:18603839 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01312 06 9891222 9895822 Bva06g01312 06 9891222 9895822 ECH