Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01277 ATGAAGACGACGAAGGGAGGCAAGGTGATGAACCCCACCGATGCTTACCGAAAGGAGCTTCGTAAGAAGGAATTAAAAAGGaataagaaagagagaaagaaggtgAGGGAAGTGGGGATTTTGAAGAAGGACCCTGAACAACTTATGAAGCAAATAGAGAACTTGGAGATGATGAAGGCTGATGGTGCTTTGGATAAAGCCAGAAAGCACAAGAAGAGACAGCTACAAGACACACTTAACCTTGTTCTAAAGAAGAGGAAGgaatatgaagaaaaaatgaaggagAAGGGGGAGACCCCTGTTATGTTCAGTCATTTAGGGCCTCCTCGAAGAAGAACAACtgcagaggaagaagagagagtTAAGCACCCAAAGCCTGAGGACTCTGTTTACTATCATCCAACACTGAACCCCACTGGGGCTCCGCCACCAGGGAAACCGCCCATGTTTAAATCATCAATAGGACCAAGAATTCCCTTGTCTGGTGCTTCATCAAGTGGTGCTGCATCATCGTCAATGACAGAGGCAGAGGATGATGTATTAGCCGTGCCTCCTCCTCCCCCACCTCCGCCGCCACCGCCTCTGCCTGATACTGGCAGTGTGAACTCAGCAGATGGCTCTGTTTTGCCTACATCGTTGCCTCTACCTCCTCCACCTCCTATGCCTCCAAAGCCTGCTACAACCAATTTACCTTCGTCATTACCACCACCTCCTTTGCCACCTCCGCCTCCTGGTCCCCCACCTAAAGACCAAGTTGCAAACCGTCCCATAGCCCCTCCACCTCCGCCCCTCCAGCAATCTCAGCCACCTCCACCTGGCACCGGTGGTGgtgaaagggaaagaaatcaGTCAGCATTATTGGATGATTCATCTTCCAAGGAGCCTGGTCAGGTGCCTCTTCCTCCACCTCCTCCACCAAGTGGGGTGCCACCAAAATCTGCTACTAGTCAGTCAGATGGTGCTCTGGTTACTGCTGACAACAAGAATCTTGTGACAGGGCAGGAGATCCCAAAAGTGGTGCCTGGACCACCTCCTCCAAGACAGCAGCCTGCACTTCCGGGACCTGCTCTAGTTCCAACTTTACAGCCTGATTTATTACCCCCTGGAATCTCTCTTTTCCCACCACCCCCACCGCCTCCAGATATGAGACTTCCTTTAGCTGCACCAGGACTCCCAGGTCAAACACCGCCTCCTGGAATGATGGTCCCAATGATTCCTCGGCCACCATATGGTCCTCCACCTGGACCTCCTCCAATGATGAGACCTCCACTTCCACCTGGTCCTCCTCCTAACTTACGGGAAGAGAACCATATAGCTAGGCCGCCTCCCCCTCCTCCTCAGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGACCACTAGCTCAGCACACTCCAGAGCTTACAGCTATGGTTCCTGCATCTGTTCGGGTTAGAAGAGAGGCTGCATTACccaaaccaaaaccaaaaccatcGCCGTCGACCTCTACTACGACGGTGGTGACTGCATCATCGGGGCCAACTGTTGTAAAGCCTGAGTCATTAAGCTCGTCATCGGCACCTAAAAAGCAGAGCATTGATGACTCATACATGGCTTTCTTAGAGGACATGAAAGCCCTTGGCGCACTTGATAGTTG 1646 0.4836 MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPEQLMKQIENLEMMKADGALDKARKHKKRQLQDTLNLVLKKRKEYEEKMKEKGETPVMFSHLGPPRRRTTAEEEERVKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLSGASSSGAASSSMTEAEDDVLAVPPPPPPPPPPPLPDTGSVNSADGSVLPTSLPLPPPPPMPPKPATTNLPSSLPPPPLPPPPPGPPPKDQVANRPIAPPPPPLQQSQPPPPGTGGGERERNQSALLDDSSSKEPGQVPLPPPPPPSGVPPKSATSQSDGALVTADNKNLVTGQEIPKVVPGPPPPRQQPALPGPALVPTLQPDLLPPGISLFPPPPPPPDMRLPLAAPGLPGQTPPPGMMVPMIPRPPYGPPPGPPPMMRPPLPPGPPPNLREENHIARPPPPPPQKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRREAALPKPKPKPSPSTSTTTVVTASSGPTVVKPESLSSSSAPKKQSIDDSYMAFLEDMKALGALDS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01277 548 Coils Coil 13 33 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 91 527 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 211 270 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 158 173 - -
Bva06g01277 548 Coils Coil 72 92 - -
Bva06g01277 548 Pfam mRNA biogenesis factor 126 186 - -
Bva06g01277 548 PANTHER WW DOMAIN-BINDING PROTEIN 11 255 547 IPR019007 GO:0006396
Bva06g01277 548 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 199 IPR019007 GO:0006396
Bva06g01277 548 Pfam WW domain binding protein 11 7 83 IPR019007 GO:0006396
Bva06g01277 548 MobiDBLite consensus disorder prediction 296 311 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 338 450 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 312 331 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 496 527 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 181 198 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 110 129 - -
Bva06g01277 548 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01277 Bva-Chr6 9726853 9731677 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01277 - - gsj:114393646 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01277 06 9726853 9731677 Bva06g01277 06 9726853 9731677 ECH