Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01267 ATGCAGATGGAGAACAATAATGAGAAATACGATGATCCTAAGATTAACTACAGAGGATGGAAGGTCATGCCCTTCATCATAGGAAATGAAACTTTTGAGAAGCTGGGAACCATTGGTACTTTATCCAACCTCTTGGTGTATCTTACAACTGTATTCAACCTCGAGAATATTACAgccaataatattataaccATCTTCCATGGCACTACCAACTTTGCTACCTTGCTTGGAGCATTTTTTTCAGACACATATTTTGGTCGTTACAAGACACTCGGATTCTCCACAGTCGCTTCCTTTGTGGGGTTGCTTATCATACAACTTACTGCAGCGGTTAAGGATCTGCATCCACCTCACTGTGGAAAGGAGGCCAACACATGCAAAGGACCAACGGCATGGCAAATGGGATTTTTTGTGCTTGGATTAGGGTCACTGCTGGTTGGAGGTGCAGGGATCCGACCATGTAACTTGGCTTTCGGAGCTGATCAGTTCAATCCCAACACAGAATCTGGAAAGAAGGGAATAAACAGCTTCTTCAATTGGTACTTCTTTACCTTCACCTTTGCCATGATGATATCCTCAACATTGATCGTCTACATTCAGTCAAACCTGAGTTGGGCAGTGGGCTTGGCAATTCCAGCAGTTTTGATGCTCTTATCATGTGCAGTCTTCTTCATGGGTACCAATATGTATGTCAAAGTTGAACCGAGTGGTAGCCCCATGACAAGTATGGTGCAAGTAATAGTGGTGgctataaagaaaagaaaactgaaacTACCTGCAGAAGATCCATCTCTCTACCTCTTCAAGTATGTGCCTCCCAAGTCCATGAACTCTAAGCTACCACATACAAATCAATTCAGGTGCCTGGACCAAGCAGCAATTATGGGTccaaaagatgaaataaaccCAGATGGATCTCCAGTCGATCCATGGAATCTTTGCAGTATGCAGCAAGTCGAAGAGTTCCCTGAGAACATGAGAAGCTTTGCAGGCTCTCTGTTCTTCTGTGCAATGGCGGTGTCTAGTTATCTGAGTACTGCACTCATCTCAGTTATCCACCATGCCACCGCTAAATCTTCAACCGGCAATTGGTTGCCACAGGATCTTAACAAGGGCAGATTAGACTACTTCTATTACGGGATTGCTGTTCTAGAAGCTGTGAATTTGGGCTACTTTCTTTTGTGTGCAAAATGGTACAAGTACAAAGGAAACAGCGGCACAAGCCTTGAACTCGAGAAGGCTTCAGAACAGTCCGAAACAGGAACTGCTAACGGTGTTTA 1280 0.4234 MQMENNNEKYDDPKINYRGWKVMPFIIGNETFEKLGTIGTLSNLLVYLTTVFNLENITANNIITIFHGTTNFATLLGAFFSDTYFGRYKTLGFSTVASFVGLLIIQLTAAVKDLHPPHCGKEANTCKGPTAWQMGFFVLGLGSLLVGGAGIRPCNLAFGADQFNPNTESGKKGINSFFNWYFFTFTFAMMISSTLIVYIQSNLSWAVGLAIPAVLMLLSCAVFFMGTNMYVKVEPSGSPMTSMVQVIVVAIKKRKLKLPAEDPSLYLFKYVPPKSMNSKLPHTNQFRCLDQAAIMGPKDEINPDGSPVDPWNLCSMQQVEEFPENMRSFAGSLFFCAMAVSSYLSTALISVIHHATAKSSTGNWLPQDLNKGRLDYFYYGIAVLEAVNLGYFLLCAKWYKYKGNSGTSLELEKASEQSETGTANGV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01267 426 Pfam POT family 89 295 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva06g01267 426 PANTHER PEPTIDE/NITRATE TRANSPORTER 321 410 - -
Bva06g01267 426 PANTHER PEPTIDE/NITRATE TRANSPORTER 9 321 - -
Bva06g01267 426 SUPERFAMILY MFS general substrate transporter 12 231 IPR036259 -
Bva06g01267 426 Gene3D MFS general substrate transporter like domains 2 322 IPR036259 -
Bva06g01267 426 Gene3D MFS general substrate transporter like domains 323 406 IPR036259 -
Bva06g01267 426 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 321 410 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva06g01267 426 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 9 321 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01267 Bva-Chr6 9673050 9675616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01267 320 405 Organic Solute Cotransporters AT5G62680 58.140 8.14e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01267 - - cit:102624501 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01267 06 9673050 9675616 Bva06g01267 06 9673050 9675616 ECH