Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01246 ATGGATTTGCGTAGCGGTTTCCCGCTGCTCCTGCAACAATTCACAGCGCTTCTGAAGAAGAATACCCTCCTCTCATGGCGGAACAAGAGAGCCTCGTTCCTCcaactcttctcttctctcttcttcatatTCCTCATCTTCGCCATTGATAAGGCAATTAACGCTCAGATTTCGTCATCCACTGCCAACAAGAGCATCACCGATCCTAAATCATTTGGCAATGATCCCATAACTCCCTGCGAGGATAAATTCTTCATTAAGCTTCCTTGCTATGATTTTGTTTGGAGCGGAAATGATAACCCCAAATTTCAAACCATTGTTGATCGTATTATGTCCAACAATCCTGGCAGGCCTATACCTTCTACTAAGGTTAAGTCCTTCAAAACTGATACCGATGTGGATGCATGGCTTTTCCAAAATCCGATGCACTGTCCAGGTGCTCTACATTTCTTTGAAAGAAACGAGACCGTAATTAGCTATGGTATACAGACAAACTCAACTTCTGTCCAATGGCGAGGAAAATATGAAGATCCgacattcaaatttcaaattccacTTCAGCTTGCTGCTGAGCGTGAAATTGCTAGACACCTGATTGGAGTCCCAAACTTCAGCTGGGAGGTTAGTTTTAAGGAATTTGCTCACCCTGCCATGGAAGTGTTCTCTACAATTGGTACAATAGGTCCAACATTTTTCCTCGCAATTGCCATGTTTAACTTTGTGCTTCAGATTGGCTCTTTGGTAACAGAAAAAGAGCTTAAACTTCGCCAGGCAATGACTATAATGGGCCTCTATGATTCTGCTTATTGGTTATCCTGGTTCATCTGGGAGGGAATTATTACATTCATATCATCACTTTTCCTAGTTCTTTTCGGAATGATGTTtcagtttgattttttcttgaagaacagTTTCGGagtcatatttcttttgtttttcctttttgaactCAATATGACTAGCTTTGCTTTTATGTTATCGGCCTTCGTTAGTAAATCATCTTCAGCCACAACGGTGGGCTTCTCAACATTTATTATTGGCTTTGTGACTCAGCTCATCATTGGAGGTGGATATATCTATAGAAAAAGCACCTCCAAGACAATCCGAACTATCTTTTCAATATTCCCACCAGATCCTTTTGCTCAAGCTCTGAGTGTGCTCTCGGAAGCAACAACAGGTCAATATGATGGTATTAGCTGGAGTCAACGGGGACAATGTGGTCCAAGCGAAGATGAATGTGTGATAACAATTAACGATATTTATAAATGGCTTCTGGCCACATTCATTGTGTGGTTTGTTTTGGCTATTTACTTCGATAACATAATCCCAAATGCATCTGGTGTAAGGAAATCAGTGATCTACTTTCTAAAACCCAGTTATTGGATAGGAAAAGGAGGAGATAGAGTCAAAGaggGTGGGATTTGTAGTTGCATGGATTCAGTTCCGCCACAAGGGAATATTACACCAGATGATGAGGACGTGCTTGAAGAGGAAAACActgtaaaacagaaaatgagagaaggtGTGCTTGATTCAGACGTTGCTGTTCAGATACGGGGCCTTGCAAAGACATATCCTGGTGCGTGGAAGTGCGGCTGCTgtaaatgcaaaaaaataactcCTTACACTGCTGTTAAGGGCTTATGGGTTAACTTTGCAAAAGACCAGTTATTTTGTCTTCTAGGACCTAATGGCGCTGGAAAAACTACTGTGATTAATTGTTTGACAGGAATTACTCCAGTAACTGGTGGAGATGCATTGGTTTATGGATATTCCATCAAAAGCTCCACTGGCATGTCAAACATTCGCAAGTTTATAGGAGTGTGTCCTCAGTTTGATATTCTATGGGACACGTTGTCTGGTCAAGAACACCTCCAGCTCTTTGCTAGCATTAAGGGCATATCCCCAACTAAAATTAATACGATTACTGAGAAGTCTTTGGCAGAGGTAAGACTCGTGGAAGCGGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGTCGTCTAAGTGTTGCAATTGCCCTTATTGGTGATCCTAAGTTAGTCATTTTGGACGAACCGACAACTGGTATGGATCCAATTACGAGGAGACATGTGTGGGACATAATTGAAAATGCCAAGCAAGGACGTGCTATTGTACTTACAACACACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCGTAGGAATCATGGCAAAGGGAAGGCTTCGTTGCATTGGCACCTCAATCCGGTTGAAATCACGCTTTGGTACTGGTTTTATAGCAAATATCAGCTTTTATGGAAACAATACTGGACCAAGTCCTCCTGCCAATGAAGATGCAGTTTCTACAACATATCGTGAGGCTGTCAAACAATTCTTCAAGAATCATTTAGATGTAGTACCTAAAGAGGAGAACAATGGCTTTCTAACTTTTGTGATCCCTCATGACAGAGAGAGGCTCTTGACGGATTTTTTTGATGAGTTGCAAGATAAAAAAGATGAATTTGGCATATCTGATATCCAGCTCGGTCTTACAACACTTGAAGAAGTTTTCTTAAACATCGCAAAGCAAGCAGAACTAGAAAGCGCTGCAGCTGAAGGGAGCTTAGTAACTTTGACTTTACCGTCAGGAGAATCTGCCCAGATACCTATAGGAGCTAGGTTTGTGGCTATTCCGGGAACAGAATCTGCAGAAAATTCCCGAGGGAATATGGTTGAAGTATATTGGGAGCTAGACGACAGCGGTGCCCTCTGCATTGCTGGGCACTCGCAAAAAGTTCCAGTACCTGATAGCGTTCAATTGTCAGCTTCTTCAACCTCAACTCGAAGAAATCTAGGTAGAGCAGGACCAGTTCATGGGATTGTCATCGATCCCGATCAAGTTAGCAGAGTCAATTTTCAGTG 2894 0.4032 MDLRSGFPLLLQQFTALLKKNTLLSWRNKRASFLQLFSSLFFIFLIFAIDKAINAQISSSTANKSITDPKSFGNDPITPCEDKFFIKLPCYDFVWSGNDNPKFQTIVDRIMSNNPGRPIPSTKVKSFKTDTDVDAWLFQNPMHCPGALHFFERNETVISYGIQTNSTSVQWRGKYEDPTFKFQIPLQLAAEREIARHLIGVPNFSWEVSFKEFAHPAMEVFSTIGTIGPTFFLAIAMFNFVLQIGSLVTEKELKLRQAMTIMGLYDSAYWLSWFIWEGIITFISSLFLVLFGMMFQFDFFLKNSFGVIFLLFFLFELNMTSFAFMLSAFVSKSSSATTVGFSTFIIGFVTQLIIGGGYIYRKSTSKTIRTIFSIFPPDPFAQALSVLSEATTGQYDGISWSQRGQCGPSEDECVITINDIYKWLLATFIVWFVLAIYFDNIIPNASGVRKSVIYFLKPSYWIGKGGDRVKEGGICSCMDSVPPQGNITPDDEDVLEEENTVKQKMREGVLDSDVAVQIRGLAKTYPGAWKCGCCKCKKITPYTAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPVTGGDALVYGYSIKSSTGMSNIRKFIGVCPQFDILWDTLSGQEHLQLFASIKGISPTKINTITEKSLAEVRLVEAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKQGRAIVLTTHSMEEADILSDRVGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNTGPSPPANEDAVSTTYREAVKQFFKNHLDVVPKEENNGFLTFVIPHDRERLLTDFFDELQDKKDEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGSLVTLTLPSGESAQIPIGARFVAIPGTESAENSRGNMVEVYWELDDSGALCIAGHSQKVPVPDSVQLSASSTSTRRNLGRAGPVHGIVIDPDQVSRVNFQ 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01246 964 PANTHER ABC TRANSPORTER A FAMILY MEMBER 9 8 946 - -
Bva06g01246 964 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 946 IPR026082 GO:0016021|GO:0055085|GO:0140359
Bva06g01246 964 Pfam ABC-2 family transporter protein 34 437 - -
Bva06g01246 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 537 743 IPR027417 -
Bva06g01246 964 SMART AAA_5 554 738 IPR003593 -
Bva06g01246 964 Pfam ABC transporter 548 690 IPR003439 GO:0005524
Bva06g01246 964 ProSitePatterns ABC transporters family signature. 663 677 IPR017871 GO:0005524
Bva06g01246 964 Gene3D - 503 757 IPR027417 -
Bva06g01246 964 CDD ABC_subfamily_A 516 749 - -
Bva06g01246 964 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 761 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01246 Bva-Chr6 9584940 9590397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01246 558 760 Calmodulin-binding Proteins AT2G36910 22.705 4.20e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01246 - - gmx:100786538 1466.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01246 06 9584940 9590397 Bva06g01246 06 9584940 9590397 ECH