Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01236 ATGGCGTCAAATATAGGTATGATGGACAGTGCATACTTTGTGGGCAGGAATGAGATTTTGACCTGGATCAACAGCACACTTCAGCTTAATCTCTCACGCATTGAGGAGGCTGCATCTGGTGCTGTACAATGCCAGATGATGGACATGACACATCCAGGGGTTGTTCCGATGCACAAGGTGAATTTTGATGCAAAGACGGAGTATGATATGATCCAGAATTACAAGGTTCTGCAGGATGTATTCAACAAGTTGAAAATTGACAAGCACATTGAAGTTAACAGGCTTGTTAAAGGCCGACCTTTGGACAACTTGGAGTTCCTACAATGGCTGAAACGCTACTGCGATTCTGTGAATGGTGGCATCATGAATGAgaACTACAATCCTGTTGAGCGAAGGTGCAAGGGTGGAAGGGACCGAAATCTTAAGAATTCTCTGAAGAGCTATAAATCACTGCAAACAAATACTATGAACCATCCTGGTTCTGGCGATACATTCAATACCAACAAAACTTCAGGGAACAGGCATGTAAGGTCAAGTGGAACAGCTGGCGAGGCTAATTCTTTGGAAGAGATTCAGGCTTTATCCAAGGAGGTTGCTGATCTCAAACTCTCTGTGGATCTcctggaaaaagaaagagatttttaCTTTGCAAAATTACGGGATATAGAAATTCTTTGTCAGACTCCAGAACTGGAGGACCTTCCTGTGTCCGTAGCAATTAAGAAGATTTTGTATGCTGCTGATGCGAAGGAATCAGCATTAGAGGAAGCTCAGGATTACCTTAACCAAACTTTGAATGATGATGAagctgaagaagaagcagaaggaGAAATTGACAAGGTCTA 845 0.4047 MASNIGMMDSAYFVGRNEILTWINSTLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIDKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGRDRNLKNSLKSYKSLQTNTMNHPGSGDTFNTNKTSGNRHVRSSGTAGEANSLEEIQALSKEVADLKLSVDLLEKERDFYFAKLRDIEILCQTPELEDLPVSVAIKKILYAADAKESALEEAQDYLNQTLNDDEAEEEAEGEIDKV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01236 281 MobiDBLite consensus disorder prediction 265 281 - -
Bva06g01236 281 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Bva06g01236 281 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 183 253 IPR004953 GO:0008017
Bva06g01236 281 SUPERFAMILY EB1 dimerisation domain-like 190 249 IPR036133 GO:0008017
Bva06g01236 281 Pfam EB1-like C-terminal motif 208 246 IPR004953 GO:0008017
Bva06g01236 281 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1 274 IPR027328 GO:0008017
Bva06g01236 281 MobiDBLite consensus disorder prediction 262 281 - -
Bva06g01236 281 Coils Coil 191 211 - -
Bva06g01236 281 Gene3D - 6 134 IPR036872 -
Bva06g01236 281 MobiDBLite consensus disorder prediction 152 184 - -
Bva06g01236 281 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Bva06g01236 281 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Bva06g01236 281 Gene3D - 189 274 - -
Bva06g01236 281 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01236 Bva-Chr6 9528865 9532481 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01236 K10436 - pop:18105798 442.965