Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01228 ATGGAATCGCCGGGGCAGTGGTTGGAGAAGGCGCTGGTTGATCTGTGCCAAAAGATAGAAACTGGATTAGGTTTAGGTCTTGATAAAGAAATCATAACTGGCCTCGTTTCTTACTGCGAGCTTGCTGATCCCCGTGATGCTAAAGAGTACCTTGAcaaTATAATTGGGCAGGAAGCGGGGAAAACTGTGATTGAAGAATATTTACGACGGAGAGGTCACTCGGAATTCAGCAACAACaactcaaatatttcaaattcaaaattacatGCCTACGTCAAGCCACCTTCAATTGAGGCATCTGCAAGTGTTCCTAAGAAATCATTGAGAGAACCAAAAGCAGTGACAGTCCCCGGTCATCATGCACAACCCAAGAAGAGTGCAGTTGGAAATAATCAGGAAAATCAGATTTCAAATGTAGGAAGTGACTCAAGaacatcaaataaagaaaaccaagtgaagtcaagaaagaagaaatcagGGAAAGCTGTTTCACTTGCTGAGGTTGCCAAAGGGTCAATTGTTTTCCAGCAGGGAAGGCCATGCTCTTGTCAAGCACGGCATCACAGACTGGTCAGCAATTGCTTATCTTGTGGCAAAATAGTTTGTGAACAAGAAGGAGAGGGACCTTGCAATTTCTGTGGTGCACTTGTGTTGAGAGAGGGGAGTACGTACGCTGGTCTTGAAGAAAGTTTGCCTGCCATATCAGATGCTGAAGCTGCTGCTGAAGCGTATGCAAAAAGGCTTGTTGACTACGACCGAAACTCTGCAGCTCGAACAACAGTTATTGATGACCAAAGTGACTACTATGAGATTGACGGCAACAGTTGGTTGTCGAAGGAGGAAAAGGAACttttgaagaagaaacaagaggAGATTGAAGAAGCTGAGCGAGCCAAACGAAATAAAGTTGTTGTAACTTTTGATCTTGTTGGCCGCAAGGTCCTTCTGAATGAAGATGAAGTTTCAGAATTACAGTCGGACAACAGAATATTGCGTCCACCGGATGAAAGGGAAGTAAACCGTATTAAACCAAATCCAACACTTAGAATTCAACCAATTTTTGTGGACCCAGGCTTAAGTAAGAAGCCTGCAAAAGATAGAGATAGACAACAAAACGAAGGCCTAAGCAAGGGTTTATGCTTGGAGATTACTGGGAGGGTGCAGCATGATAGCAATGACGTGAAATATTTTAGGATGGAAAGTCAACTCGCAGCCGCTTCAAATGGGAGCTCTTG 1235 0.4113 MESPGQWLEKALVDLCQKIETGLGLGLDKEIITGLVSYCELADPRDAKEYLDNIIGQEAGKTVIEEYLRRRGHSEFSNNNSNISNSKLHAYVKPPSIEASASVPKKSLREPKAVTVPGHHAQPKKSAVGNNQENQISNVGSDSRTSNKENQVKSRKKKSGKAVSLAEVAKGSIVFQQGRPCSCQARHHRLVSNCLSCGKIVCEQEGEGPCNFCGALVLREGSTYAGLEESLPAISDAEAAAEAYAKRLVDYDRNSAARTTVIDDQSDYYEIDGNSWLSKEEKELLKKKQEEIEEAERAKRNKVVVTFDLVGRKVLLNEDEVSELQSDNRILRPPDEREVNRIKPNPTLRIQPIFVDPGLSKKPAKDRDRQQNEGLSKGLCLEITGRVQHDSNDVKYFRMESQLAAASNGSS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01228 411 Pfam Putative zinc finger motif, C2HC5-type 179 219 IPR009349 GO:0005634|GO:0006355|GO:0008270
Bva06g01228 411 PANTHER TRANSCRIPTION REGULATOR/ ZINC ION BINDING PROTEIN 3 408 - -
Bva06g01228 411 Coils Coil 234 254 - -
Bva06g01228 411 MobiDBLite consensus disorder prediction 352 375 - -
Bva06g01228 411 MobiDBLite consensus disorder prediction 125 147 - -
Bva06g01228 411 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 3 408 IPR039128 -
Bva06g01228 411 Coils Coil 278 305 - -
Bva06g01228 411 MobiDBLite consensus disorder prediction 113 161 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01228 K23398 - gmx:100810833 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01228 06 9494482 9496911 Bva06g01228 06 9494482 9496911 ECH