Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01217 ATGAACTCCATTGCTCTCAAATCCTTCGTCGGGCTCCGGCAGTCCTCGCCGGAAAAGCCCCAGTTCGCTGTTCAAGTGAAACCCGCTACCGTCCACCGGAAGCTGAAAGTGGTAGCCGGTAAATCCAGCCCCAAATTGTCTGGTCGAAACCTCCGGGTGGCAGTGATCGGCGGCGGCCCGGCTGGTGGGTCAGCTGCGGAGACATTAGCGAAAGGTGGCATCGAGACATACCTAATCGAACGGAAGATGGACAACTGCAAACCCTGCGGTGGAGCGATTCCTCTGTGCATGGTGGGAGAGTTCGATTTACCTTTGGACATCATAGATCGACGGGTcacaaaaatgaagatgatttCCCCATCAAACGTCGCCGTCGACATAGGCCAAACTCTTAAACCCCACGAGTACATTGGAATGGTTCGGCGTGAGGTACTAGATGCTTACCTTAGGGAACGGGCCAAGGAAAATGGGGCCAATGTTATAAACGGTTTATTCTTGAAAATGGATATCTCCAAAGATGACAATGCTCCTTATGTCTTGCACTACTCTGCCTACGACGGCAGTGGAAGCGgtgaaagaaaaactttagAAGTTGATGCTGTGATTGGAGCTGACGGCGCTAATTCCAGAGTCGCCAAGTCTATTAATGCAGGCGACTATGAATATGCCATCGCATTTCAGGAGAGGATAAAAATTCCAGATGATAAAATGGTGTACTACGAGAACCTGGCCGAGATGTACGTTGGTGACGATGTTTCCCCTGATTTCTATGGTTGGGTGTTTCCGAAATGCGATCATGTTGCTGTTGGCACTGGCACGGTGACTCATAAGGGGGACATCAAGAAATTCCAACTTGCTACGAGGAACAGAGCAAAAGACAAGATTTTGGGAGGGAAAATCATCCGAGTTGAGGCACACCCTATCCCAGAACATCCTCGCCCGCGAAGATTGTCAGGGAGAGTAGCATTAGTGGGTGATGCTGCTGGGTATGTGACCAAATGCTCTGGGGAAGGAATCTATTTTGCAGCAAAGAGTGGGAGAATGTGTGCAGAGGCAATAGTTGAAGGTTCAGAGAATGGGAAGAGAATGGTGGACGAAGGAGACATAAGGAAGTACTTGGAGAAGTGGGACAAGACTTATTGGCCAACTTACAAGGTGTTGGACGTGCTGCAGAAGGTTTTCTATAGGTCTAATCCAGCTAGAGAGGCTTTTGTGGAGATGTGTGCTGATGAATATGTGCAAAAAATGACCTTTGATAGCTATTTGTACAAGACGGTGGCACCTGGGAATCCTCTGCAGGATTTGAAGTTGGCTATTAACACCATTGGCAGCTTGGTCAGGGCTAATGCAATCACAAGGGAGATGAAAAAGCTTGGTGTATG 1382 0.4776 MNSIALKSFVGLRQSSPEKPQFAVQVKPATVHRKLKVVAGKSSPKLSGRNLRVAVIGGGPAGGSAAETLAKGGIETYLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAKENGANVINGLFLKMDISKDDNAPYVLHYSAYDGSGSGERKTLEVDAVIGADGANSRVAKSINAGDYEYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVDEGDIRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVAPGNPLQDLKLAINTIGSLVRANAITREMKKLGV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01217 460 TIGRFAM BchP-ChlP: geranylgeranyl reductase 52 447 IPR010253 GO:0015979|GO:0015995|GO:0045550
Bva06g01217 460 SUPERFAMILY FAD/NAD(P)-binding domain 51 431 IPR036188 -
Bva06g01217 460 Gene3D - 50 458 IPR036188 -
Bva06g01217 460 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 52 74 - -
Bva06g01217 460 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 197 212 - -
Bva06g01217 460 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 333 - -
Bva06g01217 460 TIGRFAM GG-red-SF: geranylgeranyl reductase family 53 353 IPR011777 GO:0016628
Bva06g01217 460 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 216 IPR023753 GO:0016491
Bva06g01217 460 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 28 458 - -
Bva06g01217 460 PANTHER OS01G0265000 PROTEIN 28 458 - -
Bva06g01217 460 TIGRFAM ChlP: geranylgeranyl reductase 51 447 IPR011774 GO:0045550
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01217 Bva-Chr6 9443347 9445229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01217 K10960 - gmx:100814603 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01217 06 9443347 9445229 Bva06g01217 06 9443347 9445229 ECH