Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01213 ATGAAGCCTAGTAGTAGTCCTAGTAGCAGAGAggcaaaaagaagaagccGTCCTTCGTCACCGACACGAGTGAGGGAGCAAAGCTCCATTAGCTCTGGGATAGGGTTCGAACCAACGGCGTCACGGTCCAGACTTAGCCCTTCTACCACTCTCCTCGACGATACTGACCTCGTCACCGAATTGCAAGACTACGCTAATTCTGACCCTAATCCTCGGAGCTTTCCCTACGCTGTCAAACAACAATGCTGGGAAAAGGCCGACAAGATCAAAGGACGAGACCCCGATCGCTGGCGCAGGGACGCCCTTGGCAACACTGTCTTTCGGAAGCTTGTTGGTTGCCCTGGTTGTCTCTGTCATGATTATGATCACATTATCCCCTATTCTAAGgGAGGAAAAAGCACGCTGGAGAATTGTCAAGTGTTGCAGGCGACAGTTAATCGATCAAAGGGGAATCGAACAGACCTTTCAAAAGCTGAACTTATTCAGAAGAGTTCTTATTGCAGGGTTTCAGGTCGTGATATGGATCTTCTTGAACTGTCTGCCTATGGCAACGTCCGGCGCGGACCTGATTCCGGTGGTTGTAGAATCCAATG 593 0.4857 MKPSSSPSSREAKRRSRPSSPTRVREQSSISSGIGFEPTASRSRLSPSTTLLDDTDLVTELQDYANSDPNPRSFPYAVKQQCWEKADKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHIIPYSKGGKSTLENCQVLQATVNRSKGNRTDLSKAELIQKSSYCRVSGRDMDLLELSAYGNVRRGPDSGGCRIQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01213 197 CDD HNHc 106 150 IPR003615 -
Bva06g01213 197 MobiDBLite consensus disorder prediction 1 51 - -
Bva06g01213 197 Pfam HNH endonuclease 119 152 IPR002711 GO:0003676|GO:0004519
Bva06g01213 197 Gene3D - 78 171 - -
Bva06g01213 197 MobiDBLite consensus disorder prediction 7 21 - -
Bva06g01213 197 SMART HNH_5 102 147 IPR003615 -
Bva06g01213 197 PANTHER HNH ENDONUCLEASE 8 197 - -
Bva06g01213 197 MobiDBLite consensus disorder prediction 22 51 - -
Bva06g01213 197 PANTHER HNH ENDONUCLEASE 8 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01213 Bva-Chr6 9420316 9423789 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01213 - - gmx:100500174 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01213 06 9420316 9423789 Bva06g01213 06 9420316 9423789 ECH