Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01200 ATGGGAAGGATCGTCTATGCAATGTTGATGCTTACTCGGCGTAAAGCCTTGCCCATCTATCTCAAGCTCCCTTCATTGATATTGAGATTAGCATCATCCTCGCattcttctgcttctgcacCACTATCTCCTTCTGATTTGTGTATAATAAATACACTTCTCAGTTGCAGAACCCCTAACGAAGCACTTGAGTGCTTCAATGAGGCCTCCAAACGAGTTAATCCAGCGAAAAGTCCCCAGCTTTACGCTGCTAGCATCCATATCTTAACGGGCGCCAAGCTGTATAGAGTAGCTACGTTCTTGACCAAAAACCTCTTTCAGAAGCTCCAAAAGTCCCGGAAACCCCATGGTGCTTGCCGTTTTCTTTTCGAGGCTCTCAACCGCTTTGAGAGCTCCAAATTCACTCCCTATGTATTTGGTGTGCTGATCATTGCCTGCTGTGAGATGGCTCTCTTTGAGGAAGCATTGTGGGTTTATCGGCAGAGAAGCACTCTGCCTGCGCTGCGTGCTTGCAATGCGCTTCTGCATGGTTTGGTTAAGATAGGTGAGGTAGATTTGATGTGGGAGATATATGAGGACTTGGGGTCGCGCGGTCTTTCTCCTACTGTTGTCACCTATGGCATATTAATTAGTTGTTGTTGTAATCAAGGTGATACGATGAAGGCACGTAAGTTGTTCGATGAAATGACTGAGAAGGGGATCCAACCGACAGTGGTGATCTATACAATTCTTATACGCGTCTTTTGCGATGAGAGTAAAATGGCGGAAGCAGAGTCCATGTTTAGAACGATGAGAGACTGTGGCGTGGCTCCGAATTTGTACACTTACAATACAATTATGGATGGGTATTGCAAAATGGCTAATGTTAGGGGAGCCATTGACTTGTTTAAAGACATGCTACATCATGGCTTGCATCCAAATGTTATGACGTTTGCTATTCTAATTGATATTCTGTGTAAATTGGGCGAAATGAAGGCTGCTCGGgatttttttgctttgatgGAAAAATTTGGTGTTGTTCCTAATTCGTATGTTTATAACTCTTTGATTTATGGCTACTGCAAGGCTCGCAACTTGTCTGGAGCAATGCATTTCCAAAAAGAAATGGGAAGGTCTGAAATCATGCCAGATGTTTGCACTTACAGTATACTCATTAAAGGCCTTGCTGATTCAGGTAGATTGGAAGAAGCTAACGATTTACTACAGAAAATGCACACTGCTGGATTCCTAGCAAATTCTGTGACATACAATGTGATGATTGATGGATACAGTAAAGAAGGCAATATGGAGAAGGCTATTGATATGTGTTCTCAAATGACTGAAAGGAAAATAGAACCCAATGTCATCACATTTTCTACATTGATTGATGGCTTTTGCAAGATAGGAAACACAAAAGCTGCAATGGGTTTGTACACAGAAATGGTCATCAAAGGTATCAAGCCTGATGTAGTTGCTTACACAGCTTTGATTGATGGGCATTGTAAGGATGGAAACACAAAAGAGGCTCTCAGGCTACATAAGGAAATGCTAGATACAGGACTCACGCCCAATGTGTTTACACTAAGTTGCTTGATTGATGGCCTTTTTAAAGATGGCAAGACTAATGATGCAGTCAAATTATTCTTGGAGATAATTGGAGCTCATCAATCTAAAGATAAGATGGATAAATTGGATAAGAACCATTGTGCTCCAAACAATGTTATGTATGCCATTTTAATTCAAGGTCTGTGTAATGATGGACAGATCTTTAAGGCCACCAAGTTTTTTGCAGATATGAGATATCATGGCTTACAACCAGACGTGTTACTGTATGCTATGATGTTGAAAGTGCATTTCCGATACAGGCACGTGGTTGATGTGATGATGCTGCATGCAGACATGCTAAAGATGGGCTTCATGAGAAATAATTCCATATGTTCTGTGTTGTCTGAGGGCTATCAAGAAAATGGATACCTGAAATCAGCTCATATGTTTTCTGGGCATTTGATGGACTATGCAAATGCCCGTCCACCGTTTTTGACGATGACATTCTTGAAATGGTTCCCATTACTTCAAAGGAGTGCGAACGAAACCTTATTTTTCCCCATATGGCATTCCAAAGCTGAGTTTCACAATCGCCCAAGACCACCAAAAGCAAACCAAATTCTTAGGAAGTATCTTGACTGGAACTACCCCACCAAGGTCCTTCAACATTTCAGAAACATGTTACGAAAAAATTCTACTTTCATTGATagcttctctttcttgtttgccCTCAAAGCTTGCACCCAGAAGCATTCCACCGTCCAAGGAAAACAATTGCATTGCCTTGTTATAAAATTTGGTTATGAAGCAGTAATTCAGCTCCAGACATCTCTTCTGAATATGTATTCTGAAAGGGGGAATTTACACGATGCACATCAGATGTTTGATGAAATACcctctaaaaatattatctgcTGGACGTCTTTGATTTCTGCTTATGTTGACAATCAGAAACCCAGCAAAGCCTTGCAATTGTTCAGACAGATGCAGATCAACAATGTGGTACCAGATCAAGTCACGGTAACTGTTGCTCTCTCTGCTTGTGCTGATATTGGGGCGCTGGAAATGGGAGAATGGATCCATGCTTTTGTTCGGCGTAAAGGGCTAAACAGAGATTTGTGCCTGAATAATGCCCTCGTAAATATGTATGCTAAATGTGGGGGCATTATAACTGCCAGGAGATTGTTTGATAGCACTAGAAACAAAGATGTCACAACTTGGACATCTATGATTGTGGGCCATGCACTGCATGGGCAGGCAGAAGAAGCTCTGAAACTTTTCTCAGAAATGAATACAATGAGGGTTAAGAAAAAACAGAATGCTAGCAATTGTCTCATAGTTCCCAATGATGTAACGTTCATAGGAGTTTTAATGGCTTGCAGCCATGCGGGGCTGATTGAGGAAGGAAAGTACCATTTCAAAAGTATGACAGAAGATTATGGCATACAACCAAGAGAACCTCACTTTGGTTGCATGGTGGATCTTTTCTGCAGAGCTGGGCATCTAAGAGATGCCTATGACTTCATTAGGAAGATGCCAGTGTCGCCAAATGCAGTAATGTGGCGAACTTTGCTAGGAGCATGCAGCCTCCATGGCGACATAGAGCTAGGTGCAGAAGTTCGCCGTAAGCTGCTTGAATTGGAACCTAACAATGTGGGTGACAATGTTGCTATTTCCAATATTTATGGCAATAAAGGAATGTGGTACAAAAAGATGATTGTTAGGAATCAGATAAAACAGTCAAGAACTCCTGGTTGCAGCTCAATTGAGGTGGGAAGTGTGGTTAGTGAATTTGTGACTGCAGATGATGATCATCCTTCAAAAACCGAGATATATGATGTACTTGGGCAATTGATCAGAAACATGAAGGCTTATGGTTACTTGCCAAGGCCTTCAAGTTCAAGCTTATCTGAGGATTCATA 3446 0.4077 MGRIVYAMLMLTRRKALPIYLKLPSLILRLASSSHSSASAPLSPSDLCIINTLLSCRTPNEALECFNEASKRVNPAKSPQLYAASIHILTGAKLYRVATFLTKNLFQKLQKSRKPHGACRFLFEALNRFESSKFTPYVFGVLIIACCEMALFEEALWVYRQRSTLPALRACNALLHGLVKIGEVDLMWEIYEDLGSRGLSPTVVTYGILISCCCNQGDTMKARKLFDEMTEKGIQPTVVIYTILIRVFCDESKMAEAESMFRTMRDCGVAPNLYTYNTIMDGYCKMANVRGAIDLFKDMLHHGLHPNVMTFAILIDILCKLGEMKAARDFFALMEKFGVVPNSYVYNSLIYGYCKARNLSGAMHFQKEMGRSEIMPDVCTYSILIKGLADSGRLEEANDLLQKMHTAGFLANSVTYNVMIDGYSKEGNMEKAIDMCSQMTERKIEPNVITFSTLIDGFCKIGNTKAAMGLYTEMVIKGIKPDVVAYTALIDGHCKDGNTKEALRLHKEMLDTGLTPNVFTLSCLIDGLFKDGKTNDAVKLFLEIIGAHQSKDKMDKLDKNHCAPNNVMYAILIQGLCNDGQIFKATKFFADMRYHGLQPDVLLYAMMLKVHFRYRHVVDVMMLHADMLKMGFMRNNSICSVLSEGYQENGYLKSAHMFSGHLMDYGLQCSRE 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01200 672 Gene3D Tetratricopeptide repeat domain 548 672 IPR011990 GO:0005515
Bva06g01200 672 Gene3D Tetratricopeptide repeat domain 480 547 IPR011990 GO:0005515
Bva06g01200 672 Gene3D Tetratricopeptide repeat domain 334 409 IPR011990 GO:0005515
Bva06g01200 672 PANTHER OSJNBA0060P14.6 PROTEIN 29 650 - -
Bva06g01200 672 Pfam PPR repeat family 271 320 IPR002885 -
Bva06g01200 672 Pfam PPR repeat family 564 609 IPR002885 -
Bva06g01200 672 Pfam PPR repeat family 481 530 IPR002885 -
Bva06g01200 672 Pfam PPR repeat family 412 460 IPR002885 -
Bva06g01200 672 Pfam PPR repeat family 341 389 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 565 599 IPR002885 -
Bva06g01200 672 Gene3D Tetratricopeptide repeat domain 410 479 IPR011990 GO:0005515
Bva06g01200 672 PANTHER ATPASE EXPRESSION PROTEIN 3 29 650 - -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 447 481 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 272 306 IPR002885 -
Bva06g01200 672 Gene3D Tetratricopeptide repeat domain 221 333 IPR011990 GO:0005515
Bva06g01200 672 Gene3D Tetratricopeptide repeat domain 48 220 IPR011990 GO:0005515
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 377 411 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 167 201 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 412 446 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 482 516 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 237 271 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 344 378 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 414 448 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 204 238 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 484 518 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 310 343 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 449 483 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 274 308 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 379 412 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 170 203 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 567 601 IPR002885 -
Bva06g01200 672 TIGRFAM PPR: pentatricopeptide repeat domain 239 272 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 202 236 IPR002885 -
Bva06g01200 672 SUPERFAMILY HCP-like 214 513 - -
Bva06g01200 672 Pfam PPR repeat 232 265 IPR002885 -
Bva06g01200 672 Pfam PPR repeat 197 230 IPR002885 -
Bva06g01200 672 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 342 376 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01200 86 672 Glycosyltransferase AT1G05670 26.689 4.91e-71 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01200 - - qsu:111986403 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01200 06 9358403 9361192 Bva06g01200 06 9358403 9361192 ECH