Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01198 aTGTTGGTTTTAACAGCTCCTCTGCCCTCCGATAATCTCCGACGAGGTACTCCTCCGCATTGGCCCCTTAAATTCCCTCCGATTAATTTTCgTGAGAAATTGGGAACCATGAGTCAGGTATTCGAAGGCTACGAGCGTCAATACTGTGAGCTTTCGGCGAATCTTTCCCGGAAATGTACTGCATCAGCTGCTCTTGATGGGgAGCAGAAGAAGCAGAAACTTGCTGAAATAAACGATGGATTCGACGATGCTGATGCATTGATTCGAAAAATGGACCTTGAGGCTAGGACTTTGCCGCCAAATGTAAAGGCAACGCTTCTTGCTAAGTTAAGAGAATATAAGACTGATCTGAACAatgtgaaaaatgaatttaaaagaattaaatcaaCTAATGCTAACGTGGCTGCTCGAGATGAGTTGCTGGAGTCCGGAAATGCTGAAAAACAGATGGTATCAAGTGATCAAAGAGGAAGACTATTGGCCTCAACTGAGAGATTAAATCAGTCCACTGATAGAATAAAACAGAGTAGGCAGACAATGCTGGAGACCGAGGAGCTTGGTGTCTCTATCCTCCAAGACTTGCATCAACAACGCCAATCACTACTCCACGCCCATAAGACGATCCAAGGAGTGGATGACAACATTAGCAAGAGCAAGAAGATTTTGACGACCATGTCAAGACGAATGAGCAGGAACAAGTGGATCATTGGCTCCGTGATCACAGCTCTAGTCCTCACAATTATATTGATCCTTTATTTCAAGCTGAATCGTTA 773 0.4282 MLVLTAPLPSDNLRRGTPPHWPLKFPPINFREKLGTMSQVFEGYERQYCELSANLSRKCTASAALDGEQKKQKLAEINDGFDDADALIRKMDLEARTLPPNVKATLLAKLREYKTDLNNVKNEFKRIKSTNANVAARDELLESGNAEKQMVSSDQRGRLLASTERLNQSTDRIKQSRQTMLETEELGVSILQDLHQQRQSLLHAHKTIQGVDDNISKSKKILTTMSRRMSRNKWIIGSVITALVLTIILILYFKLNR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01198 257 Gene3D - 153 233 - -
Bva06g01198 257 Coils Coil 103 130 - -
Bva06g01198 257 SUPERFAMILY t-snare proteins 42 127 IPR010989 GO:0016020|GO:0016192
Bva06g01198 257 Gene3D - 35 136 IPR038407 -
Bva06g01198 257 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 37 256 - -
Bva06g01198 257 CDD SNARE_Vti1 163 224 - -
Bva06g01198 257 Pfam Snare region anchored in the vesicle membrane C-terminus 164 229 - -
Bva06g01198 257 PANTHER VESICLE TRANSPORT V-SNARE 13-LIKE 37 256 - -
Bva06g01198 257 Pfam Vesicle transport v-SNARE protein N-terminus 48 126 IPR007705 GO:0006886|GO:0016020
Bva06g01198 257 SUPERFAMILY SNARE fusion complex 166 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01198 Bva-Chr6 9349299 9351386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01198 K08493 - cit:102625899 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01198 06 9349299 9351386 Bva06g01198 06 9349299 9351386 ECH