Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01195 atggggCAAGAGAATCACACAGCTCAGAAGAGAAGTAGTGGAACTGTGTTGCCGACTAGTACTGCCCCTAACGGCAGAAGCCGTGCATTTGGTAACTTACCCCGTGGCCGGCAGATCCACAAGACCTTCAACAACATCAAGATCACCATTCTCTGTGGCTTCGTAACGATCCTCGTCCTCCGCGGCACCATTGGCGTTAACCTCGGAAGCTCGGAGGCTGACGCCGTCAACCAAAATCTCATCGAAGAGACTAACCGGATCCTTGCTGAGATCAGATCTGATAGTGATCCTAACGATCCAGACGAACCCAGCGAGACCGAATTAAATCCAAATATAACCTTCACTCTTGGGCCGAAGATCAGCAACTGGGATCATGAGCGGAAGGCTTGGCTGGATCAGAATCCCGAGTACCCAAATTACATTAGAGGTAAAGCTCGAATTTTGCTCCTAACTGGCTCACCTCCGAAACCTTGCGACAATCCAATTGGGgatcattatttattgaagTCCATAAAGAATAAGATTGATTATTGTAGATTACATGGGATCGAAATCGTGTATAATATAGCTCATCTGGATAAGGAGCTTGCTGGGTATTGGGCAAAACTGCCCATGATTCGGCGTTTGATGTTGTCGCATCCAGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCCTTTTTTACTGACATGATCTTTGAACTTCCCTTATCTAAGTATGATGAGTATAATTTGGTTCTTCATGGGTACCCTGATCTGCTGTTCGAGCAAAAGTCATGGATTGCAGTAAATACTGGGAGTTTTCTGTTTAGAAATTGCCAGTGGTCTTTGGATTTGCTTGATTCTTGGGCTCCAATGGGTCCAAAAGGTCCCATTCGAGAAGAGGCGGGGAAGATTTTAACTGCGAATCTCAAGGGGAGACCAGCATTTGAGGCAGATGATCAGTCTGCCttgatatatttattgctTTCACAGAAGGATCAATGGATGGATAAGGTGTTTCTTGAGAACTCATACTATTTGCATGGTTATTGGGCTGGTTTAGTTGATCGATATGAAGAGATGATTGAGAAGTATCATCCAGGATTAGGTGATGAGAGGTGGCCATTTGTGACACATTTTGTGGGTTGCAAGCCTTGTGGAAGCTATGGAGATTATCCTGTTGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTTCAATTTTGCAGATAATCAAGTGCTAAAGCTCTATGGATTTAGGCATCGCGGTCTTTTGAGCCCTAAAATCAAGAGAATCAGAAATGAGACGGTTGCTCCCTTAGAATACGTAAACCAGTTTGATATACGAAGACTCACTATACAAAACAGTGGATCAAAAAACTA 1361 0.4357 MGQENHTAQKRSSGTVLPTSTAPNGRSRAFGNLPRGRQIHKTFNNIKITILCGFVTILVLRGTIGVNLGSSEADAVNQNLIEETNRILAEIRSDSDPNDPDEPSETELNPNITFTLGPKISNWDHERKAWLDQNPEYPNYIRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNIAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMIFELPLSKYDEYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDSWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSQKDQWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVAPLEYVNQFDIRRLTIQNSGSKN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01195 453 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 144 289 IPR029044 -
Bva06g01195 453 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 11 448 - -
Bva06g01195 453 MobiDBLite consensus disorder prediction 1 27 - -
Bva06g01195 453 MobiDBLite consensus disorder prediction 1 33 - -
Bva06g01195 453 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 11 448 IPR008630 GO:0016021|GO:0016757
Bva06g01195 453 Pfam galactosyl transferase GMA12/MNN10 family 144 382 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01195 Bva-Chr6 9342967 9345061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01195 1 445 Glycosyltransferase AT5G07720 78.761 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01195 K08238 - zju:107419204 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01195 06 9342967 9345061 Bva06g01195 06 9342967 9345061 ECH