Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01176 ATGGCCCAGGAAAGTCTTGATAGCGAGGTGACATCCAAGAAAATTGAGCACCAAGATGGTGATGAGAAGACCAACCCTACAGAGAGATTAGGTATGATAAAAAGTAAACACAAGATTGTTTCTCGATATCTTGGTGGTCATATTGGTTCCTGCCACGATTTATGCAAATATGGCATCAAACATGATGTGGAAGCTAAGCCATGGAATACAGCACAGAAAAAGCTTGCCACAAAGGGTCGGAAAATAAAAGTACCAGAAGAAAATGTGATTTCGACAGGGAATGGGAAATCAACCAGCAGTTCTTCTAAGGCTTCTCCTAAATTTGGGAAGCTTAATTGTCCTGTTTTGATTAAGGAAGTAATCGCATCATCAAGCAATGAAGAAATCAtttctttaaagaaaaatataccaCCCTTTGAGGAAACAGATGTTCCCACGGAGCATACTGGAATTGAGCTAAACCAAGCACCATTGGAACCACCTTCTTTCCCAGTTGAAGAATGTTCAAATGGTCATGGAAACATTGAAAAAGTGAAAGGCAAAACTCCCTTTGGTTCAAACAGcagaaagaaaagtgaaagcCGAAGCAAACAAATAAGGACAACCTCAATTATTGGCAAGAAGACATTGGTGCCCCCAAGTAATTCCTTGGCATCAAAGCATCATGTCAAGAAATCTTCAAGCCTAAGTACTAAGACTGctaaaaacttgaaaagagTGCGTTCTCTGGAGAATCGAAAGAAAGTTAGAAAAGTCAAACCTAAGATAGCCAGCAATGAGAATTTGCCAGAGAAAATTTTGCACATCATTGAACCTACCCTGGAGACTAAAGCTGTGGTGGAACCCACACTGGCTTGTGATAATACAAGCTTATCTTCGGTCTCACCTTCATTATCTGGGGACAAAAACTTGAATCGGGCTGATGAGCAAATTGGGAAGTCTGGATTGCCTGCAACTAAGAGGAAGAGCACTAGACATGCTGGACACAGAATACATCCAACTATATCTGCAGCACCCTCCCCACTATCTTCTGTGAGCAAAGGCAAGAGATCTATTCGGCATAAAATGCAATCATCCTCATCCTCACCACCATCACGGTCAGCATCAGCTATTTCTACACCCAAGTCTTCCCCTGGAAGACAAAATGTTGCTACTTCTAAGTACAAGAAAGCAGGACAAGGTCATCCAGGAGAAAATGTGAAGGTGGGGTACAAAATCCGGACGAGAAGCACAATAGTTGAAGGAGGAAATAAAGTTATTCCAGCTCGGAAGTTGAGTTTTAGGAGAGGAAAGATGATTGAACTTCAGCCTCAAAGCAACAACGTTCCTCGGAGACTCAAATTTAGGCCAGTACGCCTTCTTAGTGACGCCCAAAGAGAGTTAcgaaacaataacaataatagaaAAGGGATCAATAGAAGGAAGGAAGTTGATGATGGTGCATTAAATGATGTAAAAGTCAAGCTTCTGAAAGTTGTGCCCAGACTCCTAACTGTAGAAGGAAGTAAAAGGAGAAGCTTTAAGAGGAAGGGTGCTGATGGATGCAAGTTAGATGGTTCAAAATCAGGATCCGAGCAGGTTGTTCTCAGACACCAAAATGAGGAAGGGAATAAAGTTACCAGGCGTTTGTATAATAATGTGATTGAAGAGACTGCAAGCAAGCTTGCCGAGCTTAGGAAGAGCAAAGTCAAGGCTTTGGTTGGTGCATTTGAAACCGTAATATCTCTTGATTCTCCTCGAGAGGCGACACCCTTGGAAATAACCACTGCATGTTG 1775 0.4056 MAQESLDSEVTSKKIEHQDGDEKTNPTERLGMIKSKHKIVSRYLGGHIGSCHDLCKYGIKHDVEAKPWNTAQKKLATKGRKIKVPEENVISTGNGKSTSSSSKASPKFGKLNCPVLIKEVIASSSNEEIISLKKNIPPFEETDVPTEHTGIELNQAPLEPPSFPVEECSNGHGNIEKVKGKTPFGSNSRKKSESRSKQIRTTSIIGKKTLVPPSNSLASKHHVKKSSSLSTKTAKNLKRVRSLENRKKVRKVKPKIASNENLPEKILHIIEPTLETKAVVEPTLACDNTSLSSVSPSLSGDKNLNRADEQIGKSGLPATKRKSTRHAGHRIHPTISAAPSPLSSVSKGKRSIRHKMQSSSSSPPSRSASAISTPKSSPGRQNVATSKYKKAGQGHPGENVKVGYKIRTRSTIVEGGNKVIPARKLSFRRGKMIELQPQSNNVPRRLKFRPVRLLSDAQRELRNNNNNRKGINRRKEVDDGALNDVKVKLLKVVPRLLTVEGSKRRSFKRKGADGCKLDGSKSGSEQVVLRHQNEEGNKVTRRLYNNVIEETASKLAELRKSKVKALVGAFETVISLDSPREATPLEITTAC 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01176 591 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 591 - -
Bva06g01176 591 Coils Coil 454 474 - -
Bva06g01176 591 SMART CaM_binding_2 466 575 IPR012417 GO:0005516
Bva06g01176 591 MobiDBLite consensus disorder prediction 9 31 - -
Bva06g01176 591 MobiDBLite consensus disorder prediction 198 236 - -
Bva06g01176 591 PANTHER EMB|CAB62594.1 1 591 - -
Bva06g01176 591 MobiDBLite consensus disorder prediction 355 388 - -
Bva06g01176 591 MobiDBLite consensus disorder prediction 167 255 - -
Bva06g01176 591 MobiDBLite consensus disorder prediction 1 31 - -
Bva06g01176 591 MobiDBLite consensus disorder prediction 90 106 - -
Bva06g01176 591 MobiDBLite consensus disorder prediction 87 106 - -
Bva06g01176 591 Pfam Plant calmodulin-binding domain 487 575 IPR012417 GO:0005516
Bva06g01176 591 MobiDBLite consensus disorder prediction 288 304 - -
Bva06g01176 591 MobiDBLite consensus disorder prediction 288 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01176 Bva-Chr6 9251490 9254779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01176 - - gmx:102665166 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01176 06 9251490 9254779 Bva05g00519 05 2554185 2557565 ECH
Bva06g01176 06 9251490 9254779 Bva06g01176 06 9251490 9254779 ECH