Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01170 ATGTTTGGTACAAAGAAATCTCCCTTAAAATTTGGGAAGCCTAGCTCCGCCGATCCTGTCTATCCTGTTCAATCCGGGTCAAACCCCTTTAATTCTGATGATGAGGCAAAGGATACTAAAAAGCATAATTCCTCAAGAAAGACTTCTTCAGAACCAGCACCAGTTAAACCAGAACTTAACACCAATCCATTTGATGACTATGATGGAAATGAGAACTCCTCTTCATCATCGTCTTATGCTCTTCGATCAGATGCCCGAAACAATTATAAGAATGATTTCCGTGACTCAGGAGGATTAGAGAATCAATCAATGCAAGAATTGGAGAATTATGCTGTTTACAAGGCTGAAGATACTACAAAATCTGTCAACAGTTGTTTGAAGATAGCAGAGGAAATAAGAGAGGATGCTACCAAGACTCTAGTCACCCTGCATCAACAGGGTGAACAGATTACCAGGACCCACTATGTTGCTGCTGACATTGATCATGATCTAAGTCGGGGAGAAAAGCTTTTGGGAAGTCTTGGTGGCATCTTCTCCAAAACGTGGAAACCGAAGAAGACACGCCAAATAACTGGCCCTGTTATTGTTGGAGATGATCCGGTCAGAAAAAAGGGTAGCCACTTGGAGCAGAGAGAGAAGTTGGGATTGACTTCTTCACCTGCACCCAGAGGGCAGTCAAGTGCACCAACGCCAACTTCAGAGCCAACAAATGCACTTGAAAAAGTCGAGGTTGAAAAGAGGAAGCAAGATGATTCACTCTCGGATTTAAGTAATCTCTTGGGAGAGCTAAAAGACATGGCTGTTGACATGGGATCCGAAATTGACAGGCATAACAAAGCCCTGGACCCTCTAGACAATGATGTGGAAGAGTTGAATTACCGCATGAAAGGGGCTAATCAGCGTGGTCGTCGTTTACTTGGAAAATA 926 0.433 MFGTKKSPLKFGKPSSADPVYPVQSGSNPFNSDDEAKDTKKHNSSRKTSSEPAPVKPELNTNPFDDYDGNENSSSSSSYALRSDARNNYKNDFRDSGGLENQSMQELENYAVYKAEDTTKSVNSCLKIAEEIREDATKTLVTLHQQGEQITRTHYVAADIDHDLSRGEKLLGSLGGIFSKTWKPKKTRQITGPVIVGDDPVRKKGSHLEQREKLGLTSSPAPRGQSSAPTPTSEPTNALEKVEVEKRKQDDSLSDLSNLLGELKDMAVDMGSEIDRHNKALDPLDNDVEELNYRMKGANQRGRRLLGK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01170 308 Gene3D - 240 307 - -
Bva06g01170 308 MobiDBLite consensus disorder prediction 33 47 - -
Bva06g01170 308 CDD SNARE_SNAP25N_23N_29N_SEC9N 109 173 IPR044766 GO:0005484|GO:0031201
Bva06g01170 308 MobiDBLite consensus disorder prediction 1 102 - -
Bva06g01170 308 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 243 305 IPR000727 -
Bva06g01170 308 MobiDBLite consensus disorder prediction 239 253 - -
Bva06g01170 308 SUPERFAMILY SNARE fusion complex 102 172 - -
Bva06g01170 308 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 308 - -
Bva06g01170 308 SMART tSNARE_6 107 174 IPR000727 -
Bva06g01170 308 SMART tSNARE_6 238 305 IPR000727 -
Bva06g01170 308 SUPERFAMILY SNARE fusion complex 243 306 - -
Bva06g01170 308 MobiDBLite consensus disorder prediction 189 253 - -
Bva06g01170 308 MobiDBLite consensus disorder prediction 65 85 - -
Bva06g01170 308 MobiDBLite consensus disorder prediction 219 237 - -
Bva06g01170 308 Gene3D - 98 175 - -
Bva06g01170 308 CDD SNARE_Qc 246 304 - -
Bva06g01170 308 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01170 Bva-Chr6 9218359 9221219 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01170 K18211 - gmx:100809874 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01170 06 9218359 9221219 Bva06g01170 06 9218359 9221219 ECH