Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01165 ATGGGTTGTGTCCCTAGCAAAAACGCTGATACGAAGGCCAGTAGGATCGCTCGGTGGCGATCCACTGGCATTGTTGCTTTGCGCGACTCCAAATTGAAGACATTCCCGAATGAAATACTTGATCTAGACCGATCTGTGCGCACTCTTGACTTGACACATAATCGAATAGTTGACGTTCCCATGGATATTggcaaattaattaacttgcaGCGCCTGGTGTTAGCCGAAAACCTCATTGAGAGACTCCCAGTGAATTTGGGGAAACTCCAATCTCTAAAAGTTATGACCCTTGATGGAAATCAAATTACTTCCTTGCCTGATGAAATTGGTCAGTTAGTTAGGCTTGAAAGCTTATCCATCTCGGGGAATTTGTTAACAAGCTTGCCTACGACTATTGGCAGCTTGAGGAATCTGTTACTTTTGAATGTGTCGAATAACAAGTTAAAGTCTTTCCCAGAATCTGTTGGGTGTTGCTTCTCTCTGGAAGAATTACAAGCCAATGATAATCTCATTGAGGATCTTCCCCCTTCAGTGTGCAATCTGGTTCACTTGAAGTCACTTTGCTTAGATAAGAATAATGTGAAGCAGATACCTCCTAATCTATTGAAAGACTGCAAAGCTCTTCAGAACATTTCTCTGCACGGTAATCCTATATCAATGGATCAATTTCAACAAATGGATGGGTTTCAAGAGTTTGAAGCAAGGAGGAGAAAGAAGTTTGACAAACAAATTGATTCGAATGTAATGATTAGTTCCAAAGGTCTCGATGAGGGTGTCGATCTATG 785 0.4064 MGCVPSKNADTKASRIARWRSTGIVALRDSKLKTFPNEILDLDRSVRTLDLTHNRIVDVPMDIGKLINLQRLVLAENLIERLPVNLGKLQSLKVMTLDGNQITSLPDEIGQLVRLESLSISGNLLTSLPTTIGSLRNLLLLNVSNNKLKSFPESVGCCFSLEELQANDNLIEDLPPSVCNLVHLKSLCLDKNNVKQIPPNLLKDCKALQNISLHGNPISMDQFQQMDGFQEFEARRRKKFDKQIDSNVMISSKGLDEGVDL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01165 261 Pfam Leucine rich repeat 160 218 IPR001611 GO:0005515
Bva06g01165 261 Pfam Leucine rich repeat 44 102 IPR001611 GO:0005515
Bva06g01165 261 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 253 - -
Bva06g01165 261 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Bva06g01165 261 SMART LRR_bac_2 160 177 - -
Bva06g01165 261 SMART LRR_bac_2 112 131 - -
Bva06g01165 261 SMART LRR_bac_2 135 154 - -
Bva06g01165 261 SMART LRR_bac_2 89 108 - -
Bva06g01165 261 SMART LRR_bac_2 66 85 - -
Bva06g01165 261 ProSiteProfiles Leucine-rich repeat profile. 137 158 IPR001611 GO:0005515
Bva06g01165 261 Gene3D Ribonuclease Inhibitor 6 240 IPR032675 -
Bva06g01165 261 SUPERFAMILY L domain-like 19 221 - -
Bva06g01165 261 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED 2 253 - -
Bva06g01165 261 SMART LRR_typ_2 112 134 IPR003591 -
Bva06g01165 261 SMART LRR_typ_2 181 204 IPR003591 -
Bva06g01165 261 SMART LRR_typ_2 135 158 IPR003591 -
Bva06g01165 261 SMART LRR_typ_2 89 111 IPR003591 -
Bva06g01165 261 SMART LRR_typ_2 66 88 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01165 Bva-Chr6 9189890 9195511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01165 46 219 Receptor kinase-like Gene Family AT5G46330 29.412 1.95e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01165 - - zju:107419165 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01165 06 9189890 9195511 Bva06g01165 06 9189890 9195511 ECH