Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01153 ATGGCGGTTAGCAGCTCAACTTCAACCTCCCAAGAAAAACAAGCTTTGGGGAGCCATTCTCAAGCTCAGTTCTTTGTATGGAGAGAGTTTGTATGGGGAGCTATTGCTGGGGCTTATGGGGAAGGAATGATGCATCCAGTGGATACCATTAAAACACGAATTCAAAGTCAAGCAATTCTAGATGGAATTCAGAACCAGAAGAGCGTTCTGCAGATGGTGCGATCTGTCTGGCAAGCTGATGGGTTTAGAGGCTTTTACAGAGGTGTAACACCTGGGATTACTGGGTCTCTTGCTACTGGTGCCACCTACTTTGGAGTCATAGAGTCCACTAAAAAGTGGATTGAGGACTCACATCCTAGCCTTGGGGGCCACTGGGCACATTTTATTGCCGGAGCTGTTGgaGATACACTTGGTTCTTTTGTGTATGTTCCATGCGAAGTGATGAAGCAACGCATGCAGGTTCAAGGCACAATGACATCTTGGAGTtcgatgatgatgaaagatgGCATTTCCAAGTCTGGCAACCCAAGATATAGTTACTATACAGGGATGTTTCATGCTGGCTCTTCAATATGGAAGACACACGGCCTGAAGGGTTTATATGCAGGATATTGGTCTACACTGGCAAGGGATGTTCCTTTTGCTGGACTAATGGTCGTATTTTATGAATCTTTGAAAGATGTTACTGAATATGGGAAGCAGAAAGGGATGTTGAGCCTAAACTGGCATGTTAATAGTTCTTTGGAGGGGCTTGTATTAGGAGGATTAGCCGGTGGCCTTAGTGCATATCTCACCACTCCCTTGGATGTCATCAAAACAAGACTGCAAGTGCAGGGTTCAACTATCAGGTACGATGGCTGGTTGGATGCAATTCATAATATATGGGCGAAGGAAGGCGTGACCGGGATGTTTAGGGGTAGCATCCCCAGGATTACATGGTATATACCAGCTTCAGCGCTTACATTCATGGCCGTGGAATTTCTGAGAGATCATTTTAATGAAAGAGTGGGTGGTAATAATCTGCAAGAAGTTGCTCGATTATCAGTGGATAACAAAAAATCTTCTTTACAAGAGATTTCTTG 1082 0.4381 MAVSSSTSTSQEKQALGSHSQAQFFVWREFVWGAIAGAYGEGMMHPVDTIKTRIQSQAILDGIQNQKSVLQMVRSVWQADGFRGFYRGVTPGITGSLATGATYFGVIESTKKWIEDSHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTMTSWSSMMMKDGISKSGNPRYSYYTGMFHAGSSIWKTHGLKGLYAGYWSTLARDVPFAGLMVVFYESLKDVTEYGKQKGMLSLNWHVNSSLEGLVLGGLAGGLSAYLTTPLDVIKTRLQVQGSTIRYDGWLDAIHNIWAKEGVTGMFRGSIPRITWYIPASALTFMAVEFLRDHFNERVGGNNLQEVARLSVDNKKSSLQEIS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01153 360 Pfam Mitochondrial carrier protein 248 334 IPR018108 -
Bva06g01153 360 Pfam Mitochondrial carrier protein 124 228 IPR018108 -
Bva06g01153 360 Pfam Mitochondrial carrier protein 25 116 IPR018108 -
Bva06g01153 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 228 IPR018108 -
Bva06g01153 360 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 355 - -
Bva06g01153 360 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 355 - -
Bva06g01153 360 SUPERFAMILY Mitochondrial carrier 26 328 IPR023395 -
Bva06g01153 360 Gene3D Mitochondrial carrier domain 173 351 IPR023395 -
Bva06g01153 360 Gene3D Mitochondrial carrier domain 3 172 IPR023395 -
Bva06g01153 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 113 IPR018108 -
Bva06g01153 360 ProSiteProfiles Solute carrier (Solcar) repeat profile. 245 331 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01153 Bva-Chr6 9101093 9104344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01153 26 329 EF-hand Containing Proteins AT2G35800 29.355 1.01e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01153 - - gmx:100790921 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01153 06 9101093 9104344 Bva06g01153 06 9101093 9104344 ECH