Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01143 ATGGCTTCCTCACGCGCACCCTTTATTTTAAACTTCACAGCTTTTGTATTTCTGCTTCTCATTGTCGGATGCACTGCGAGGCCTTTCCATCCACTCCCTAGTAAAAATAATGCTGATGGAAGTAGGCAGCCTCTACAAACTTTTCGCCCATTTAACATTGCACATCGAGGTTCAAATGGGGAGCTTCCTGAAGAAACTGCACCCGCATACGTGAGAGCAATTGAAGAAGGAGCAGACTTCATTGAAACTGATATCTTATCTTCGAAAGATGGTGTTCTTATATGCTTCCATGATGTAACACTTGATGATACCACTGACATTGCAAATCACAAGGAGTTTGCAAATCGTAAAAGGACTTATGAAGTCCAAGGGGTTAACATGACTGGCTTTTTCACTGTTGATTTCTccttaaaggaattgaagtCATTAAGAGTGAAGCAAAGGTTTAGCTTCCGGGATCAACAATATAATGgaaaatttgaaatcattaCTTTTGAAGAGTTCATTTCTATTGCATTGGGCGCCCCCAGAGTTGTTGGAATATATCCAGAGATAAAGAACCCAGTTTTTATCAATCAGCATGTGAAATGGTCAAGTGGTAAGAGATTTGAGGACAAGTTTGTAGAGACACTTAAGAAATATGGATATAAGGGTTCATATTTGTCAAAAGATTGGCTAAAAAAACCTGCATTTGTTCAGTCATTTGCTCCAACTTCACTTGTGTATATATCGAAACAGACGGACTTACCCGAGATTTTGTTAGTTGGTGATATTAATATTCCAACACAAGACACTAATCAGTCATATTGGGAGATTACATCTGACAGCTATTTCGACTACATAAAGAAATATGTTGTAGGAATTGGACCTTCGAAGGACACAGTGGTTCCTGCTGTAAATAACCATTTGCAAACTCCTACTGATCTTGTTACCAGGGCACATGCACATGACCTGCAGGTACATCCGTATACTTACCGAAACGAGAACTTGTTTTTGCACCTCAACTTTAGTCAAGACCCGTATGAGGAGTATGATTATTGGATCAACAAGATAGGAGTTGATGGTCTGTTTACAGACTTCGCAGGTAGCCTTCACAACTTCCAGAAATGGACCTCCGCTAAGCCTTCAGGTGACAAGGGCGACCGCAGGGCATCTAAGCTATTGCGTGAAATTTCATTGTTGGTCTCCTCGTATAAAAGGGCATG 1205 0.3967 MASSRAPSFVFLLLIVGCTARPFHPLPSKNNADGSRQPLQTFRPFNIAHRGSNGELPEETAPAYVRAIEEGADFIETDILSSKDGVLICFHDVTLDDTTDIANHKEFANRKRTYEVQGVNMTGFFTVDFSLKELKSLRVKQRFSFRDQQYNGKFEIITFEEFISIALGAPRVVGIYPEIKNPVFINQHVKWSSGKRFEDKFVETLKKYGYKGSYLSKDWLKKPAFVQSFAPTSLVYISKQTDLPEILLVGDINIPTQDTNQSYWEITSDSYFDYIKKYVVGIGPSKDTVVPAVNNHLQTPTDLVTRAHAHDLQVHPYTYRNENLFLHLNFSQDPYEEYDYWINKIGVDGLFTDFAGSLHNFQKWTSAKPSGDKGDRRASKLLREISLLVSSYKRA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01143 395 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Bva06g01143 395 CDD GDPD_ScGlpQ1_like 44 354 - -
Bva06g01143 395 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 7 370 - -
Bva06g01143 395 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Bva06g01143 395 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6 7 370 - -
Bva06g01143 395 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Bva06g01143 395 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Bva06g01143 395 SUPERFAMILY PLC-like phosphodiesterases 44 360 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01143 Bva-Chr6 9055818 9060272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01143 1 395 Acyl Lipid Metabolism Gene Families AT1G74210 70.202 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01143 K01126 - gmx:100778145 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01143 06 9055818 9060272 Bva06g01143 06 9055818 9060272 ECH